Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq600 127 3e-24
seq510 107 3e-18
>seq600
Length=572387
Score = 127 bits (140), Expect = 3e-24
Identities = 679/1071 (63%), Gaps = 24/1071 (2%)
Strand=Plus/Minus
Query 71779 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAAC 71838
||||| || | || | || |||||||| ||||| || |||||||| || || || ||
Sbjct 324626 ATGGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 324567
Query 71839 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 71897
|| ||||||| ||| |||||| || | ||| || | ||||| | || ||||||| ||
Sbjct 324566 GGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGAT 324508
Query 71898 TATATTCTTGT-ATCTCTTTTCTCTT--TCGTATTGTGTATATAATCGTTCGAACTCGTC 71954
| |||| | | | ||||| ||||| | | || | |||||||| ||
Sbjct 324507 GGT---CTTGCGACCACGGCCCTCTTGCTCGTACTTGGCGTAGAGAGCATCGAACTCATC 324451
Query 71955 TCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATC 72014
|| | ||| | | ||| || ||| || || || | | || ||| || || |
Sbjct 324450 ACCATAGACATCAGCCAGTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTT 324391
Query 72015 ATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 72074
| | || || ||||| |||||||| || |||| | ||| || || || | ||
Sbjct 324390 GGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGGC 324331
Query 72075 TCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 72134
| | |||||| || || ||||| |||||||||||| | | | ||| | ||
Sbjct 324330 ACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTG 324271
Query 72135 CCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTA 72194
|||||| |||| ||| ||||| | | || || || ||||| || ||||| || | |||
Sbjct 324270 CCACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTA 324211
Query 72195 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 72254
| |||||||| ||| | || | | ||| |||| ||||| ||||| | ||| |||||
Sbjct 324210 GCGTGCGGTGTTGTTAAACACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGGT 324151
Query 72255 CCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGC 72314
|| || || || | || ||||| | | ||||| || || || ||
Sbjct 324150 TCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGC 324091
Query 72315 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 72374
| || ||||| | || || || | || |||||||| ||||| || || || |
Sbjct 324090 AGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCCGC 324031
Query 72375 CATCATGT----TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430
||| || ||| || || || || ||| | | ||| | ||||| |
Sbjct 324030 GCTCACGTCGACCAAGAAGCAAGATGCAAG----CTGGGGTTGGGGAGTAGCGGCATTGA 323975
Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 72490
| | || || || ||||| || || | || | |||| | | ||| |||||||| |
Sbjct 323974 ACAGAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGG 323915
Query 72491 CTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550
| || || ||| || ||||| || || |||||||| | || ||||| || |
Sbjct 323914 CCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGAC 323855
Query 72551 TTTCAACGATCTTGTTATTTATTTTCAACAA-GTAGGATTTTTCCAAAGTTTTAAAACCA 72609
||| | | | | | ||| | || || ||| || || | || || || ||
Sbjct 323854 GCTCAGC-AACATTTCCGTTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCG 323796
Query 72610 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATAT 72669
|| ||||||| ||||| || ||||| | ||| | || ||||| | || ||
Sbjct 323795 AAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGC 323736
Query 72670 TTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 72728
|| |||| || | | | ||| | | |||| || || |||| | | || || || ||
Sbjct 323735 TTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGG 323677
Query 72729 ATTAACATAGTTGAATAAATCCTCCATCAC--TTCACTAAATAGtttttttGTTTCCTTG 72786
|| ||||||| | | | ||| || || || | ||| | ||||| |||| ||||
Sbjct 323676 GTTCACATAGTGGTAGAGATCGGAGATGACCATTGA--GAATTGCTTTTTAGTTTGCTTG 323619
Query 72787 TGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837
|| || || || ||||| || | || || |||||||| || || || |||
Sbjct 323618 TGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 323568
>seq510
Length=829487
Score = 107 bits (118), Expect = 3e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || || ||||| || ||| |||||||| || | | || | ||||||||
Sbjct 268469 AACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 268410
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| ||||| || ||||| ||||||||||| || ||||| || || || |||||||| |||
Sbjct 268409 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 268350
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209
|| |||||||| || || || || || || ||||
Sbjct 268349 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 268316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671129250361360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |