Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq600 127 3e-24 seq510 107 3e-18 >seq600 Length=572387 Score = 127 bits (140), Expect = 3e-24 Identities = 679/1071 (63%), Gaps = 24/1071 (2%) Strand=Plus/Minus Query 71779 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAAC 71838 ||||| || | || | || |||||||| ||||| || |||||||| || || || || Sbjct 324626 ATGGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 324567 Query 71839 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 71897 || ||||||| ||| |||||| || | ||| || | ||||| | || ||||||| || Sbjct 324566 GGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGAT 324508 Query 71898 TATATTCTTGT-ATCTCTTTTCTCTT--TCGTATTGTGTATATAATCGTTCGAACTCGTC 71954 | |||| | | | ||||| ||||| | | || | |||||||| || Sbjct 324507 GGT---CTTGCGACCACGGCCCTCTTGCTCGTACTTGGCGTAGAGAGCATCGAACTCATC 324451 Query 71955 TCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATC 72014 || | ||| | | ||| || ||| || || || | | || ||| || || | Sbjct 324450 ACCATAGACATCAGCCAGTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTT 324391 Query 72015 ATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 72074 | | || || ||||| |||||||| || |||| | ||| || || || | || Sbjct 324390 GGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGGC 324331 Query 72075 TCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 72134 | | |||||| || || ||||| |||||||||||| | | | ||| | || Sbjct 324330 ACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTG 324271 Query 72135 CCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTA 72194 |||||| |||| ||| ||||| | | || || || ||||| || ||||| || | ||| Sbjct 324270 CCACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTA 324211 Query 72195 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 72254 | |||||||| ||| | || | | ||| |||| ||||| ||||| | ||| ||||| Sbjct 324210 GCGTGCGGTGTTGTTAAACACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGGT 324151 Query 72255 CCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGC 72314 || || || || | || ||||| | | ||||| || || || || Sbjct 324150 TCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGC 324091 Query 72315 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 72374 | || ||||| | || || || | || |||||||| ||||| || || || | Sbjct 324090 AGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCCGC 324031 Query 72375 CATCATGT----TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430 ||| || ||| || || || || ||| | | ||| | ||||| | Sbjct 324030 GCTCACGTCGACCAAGAAGCAAGATGCAAG----CTGGGGTTGGGGAGTAGCGGCATTGA 323975 Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 72490 | | || || || ||||| || || | || | |||| | | ||| |||||||| | Sbjct 323974 ACAGAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGG 323915 Query 72491 CTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550 | || || ||| || ||||| || || |||||||| | || ||||| || | Sbjct 323914 CCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGAC 323855 Query 72551 TTTCAACGATCTTGTTATTTATTTTCAACAA-GTAGGATTTTTCCAAAGTTTTAAAACCA 72609 ||| | | | | | ||| | || || ||| || || | || || || || Sbjct 323854 GCTCAGC-AACATTTCCGTTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCG 323796 Query 72610 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATAT 72669 || ||||||| ||||| || ||||| | ||| | || ||||| | || || Sbjct 323795 AAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGC 323736 Query 72670 TTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 72728 || |||| || | | | ||| | | |||| || || |||| | | || || || || Sbjct 323735 TTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGG 323677 Query 72729 ATTAACATAGTTGAATAAATCCTCCATCAC--TTCACTAAATAGtttttttGTTTCCTTG 72786 || ||||||| | | | ||| || || || | ||| | ||||| |||| |||| Sbjct 323676 GTTCACATAGTGGTAGAGATCGGAGATGACCATTGA--GAATTGCTTTTTAGTTTGCTTG 323619 Query 72787 TGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 || || || || ||||| || | || || |||||||| || || || ||| Sbjct 323618 TGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 323568 >seq510 Length=829487 Score = 107 bits (118), Expect = 3e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || ||||| || ||| |||||||| || | | || | |||||||| Sbjct 268469 AACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 268410 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| ||||||||||| || ||||| || || || |||||||| ||| Sbjct 268409 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 268350 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || |||||||| || || || || || || |||| Sbjct 268349 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 268316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671129250361360