Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq510 145 1e-29 seq600 127 3e-24 >seq510 Length=829487 Score = 145 bits (160), Expect = 1e-29 Identities = 332/495 (67%), Gaps = 21/495 (4%) Strand=Plus/Plus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| | |||| |||| |||||| | ||| | |||| | | ||| | Sbjct 268252 AAGAAGGCCAACTGGGCCCTTCGCTGGATCAACGACCGCGAGTCAACCTTCGCTTCGCGT 268311 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| ||||||||||| || ||||| |||||||| || || ||||| ||||||| Sbjct 268312 CTGGTTGCATTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTTGCCTCCATCTTC 268371 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || || || | |||||| | || ||||| Sbjct 268372 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGT 268431 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT---TCGCAACTATCTGCGTCCC 125603 |||||||| || ||| |||||| || || ||||| || || | | || ||| Sbjct 268432 GACGAGGGTCTCCACACTGACTTCGCTTGCCTGCTGTTCTCTCACATGAACCACCGCCCC 268491 Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663 || | | | || ||| || | ||||| ||| ||||| | || || Sbjct 268492 GA------CCCTAAGGTTGTTCAGG--AT-ATTATTGT---CGAGGCCGTCGGCATCGAG 268539 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATG 125723 || ||||| || || || | || || | | || |||||||||||| ||||| ||| Sbjct 268540 CAGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCGAAGCTGATG 268599 Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA-- 125781 ||||||||||| ||||| || || ||||| || ||| | | | || ||||| Sbjct 268600 TGCGAGTACATTGAGTTCGTTGCTGATCGCCTGCTG---GTGGCCCTCGGTAACAAGAAG 268656 Query 125782 -TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840 |||||||| || ||||| || |||||| ||| || || | || |||||| Sbjct 268657 TACTACAACGCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACC 268716 Query 125841 AACTTTTTCGAGAAG 125855 ||||| ||||||||| Sbjct 268717 AACTTCTTCGAGAAG 268731 Score = 131 bits (144), Expect = 2e-25 Identities = 195/274 (71%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 125012 TCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGT 125071 |||| | || ||| |||||||||| || || | |||||||| ||||| | || ||| | Sbjct 267843 TCATCAGATCTGGCAAATGTACAAGAAAGCCGAAGCCTCCTTCTGGACCGCTGAGGAGAT 267902 Query 125072 CGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTT 125131 |||||| || ||||| || |||| ||| | | || ||| || |||||| | || Sbjct 267903 CGATCTCTCTAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTT 267962 Query 125132 TATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGT 125190 || || ||| | |||||||||| |||| ||||| || ||||||||||| || | ||| Sbjct 267963 CATCTCTCACGTCCTGGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTTGT 268022 Query 125191 TGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAA 125250 || || ||| | |||| | || || |||| ||||| ||||| ||||| | Sbjct 268023 CGA-GCGTTTCAGTTCAGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGA 268081 Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTC 125284 ||||||| |||||| | ||||| || | ||||| Sbjct 268082 TCATGATGGAGAACATCCACTCCGAGACATACTC 268115 >seq600 Length=572387 Score = 127 bits (140), Expect = 3e-24 Identities = 310/463 (67%), Gaps = 10/463 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||| |||||| ||||| || || || || || || || | ||| ||||| |||| | Sbjct 324206 CACGCTACGTTGACCAGGGTGGTAACAAGCGCCCTGGTGCCTTTGCCATCTACCTGGAGC 324265 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | |||||||| || || || || || |||| |||| || ||| || || |||| Sbjct 324266 CGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGGAAGAACCACGGTAAGGAGGAGG 324325 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCA 97041 || ||| | ||| |||| || || | ||| || ||| | |||||||||||||| Sbjct 324326 TTCGTGCCCGTGACCTGTTCTACGCTTTGTGGACCCCCGATCTCTTCATGAAGCGCGTTG 324385 Query 97042 A---CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATT 97098 | | |||||| |||||| || | ||||| || | ||||| ||| | ||| Sbjct 324386 AGGCCAACGGTG---ACTGGACACTCTTCTGCCCTAACGAAGCCCCCGGACTGGCTGATG 324442 Query 97099 GCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTG 97157 || || || ||||| || || ||| | ||||||||||||||||| || Sbjct 324443 TCTATGGTGATGAGTTCGATGCTCTCTACGCCAAGTACGAGCAAGAGGGCCGTGGTCGCA 324502 Query 97158 AGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 |||| | || | || | |||| || ||| | ||||| | ||||||| |||||||| Sbjct 324503 AGACCA-TCAAGGCTC-AGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGG 324560 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 | || | ||| |||||||||||| | || || || ||||| || |||| Sbjct 324561 TAACCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGG 324620 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||| ||||||| |||||||| || || || |||||| Sbjct 324621 TACCATTCGCAGCTCCAACCTGTGCACCGAGATCGTTGAGTAC 324663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741048213797360