Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq876 120 7e-22
seq510 102 2e-16
>seq876
Length=62397
Score = 120 bits (132), Expect = 7e-22
Identities = 140/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || |||||||| ||||||||||| || || || | ||||||
Sbjct 15284 AAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTC 15343
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || ||||| ||||| || || | | ||| ||||||||||| || || || || ||
Sbjct 15344 CTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTGTC 15403
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||| ||||| | ||||| || || | ||||| || | || ||||| || || || ||
Sbjct 15404 CTGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACCTCAAGGGTGATGGT 15463
Query 104527 CTTACCAGT 104535
||| |||||
Sbjct 15464 CTTGCCAGT 15472
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| ||||||||||||||||| ||||||
Sbjct 14980 ATACCACCACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCA 15039
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | |||||||| || || || || || || || || | ||| || || |||
Sbjct 15040 GAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGA 15099
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || || ||||| | || ||||| || | ||| ||| | ||
Sbjct 15100 GGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCG 15159
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
||||| || ||||| ||||| || || || || || ||
Sbjct 15160 ACCTCGAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 15197
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| ||||||||||| ||||| | ||||| || || ||||| |||
Sbjct 14557 GTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCAAGCTGTTTGCCA 14616
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| ||||||||||| || || || || || || ||||| | ||
Sbjct 14617 GCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTC 14676
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| | || ||||| || || || || || || || || ||
Sbjct 14677 ACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTC 14736
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 14737 TTGACGAAAATCTGCAT 14753
Score = 107 bits (118), Expect = 4e-18
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | |||||||||||| || ||||| || ||
Sbjct 14752 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCC 14811
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | || ||||| || || || || || || || || | ||| || ||||||
Sbjct 14812 GAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 14871
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGT-T 104507
|| || || || |||||||| ||| ||||| || || || || | ||||| || | |
Sbjct 14872 GGAATGCCCTCCTTATCCTGGATC-TTGCTCTTGACGTTGTCAATAGTATC-TGAGCTCT 14929
Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || || || || || ||||| || || || || || || || ||||||||
Sbjct 14930 CGACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981
>seq510
Length=829487
Score = 102 bits (112), Expect = 2e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
||||| || |||||||| || ||||| ||||| || || || |||||| | ||||| |||
Sbjct 268315 GTTGCATTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTTGCCTCCATCTTCTGG 268374
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
||||||| | ||||| ||||| || | |||||||| ||||| |||| | |||
Sbjct 268375 CTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAC 268434
Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283
|| ||| | ||| |||||||||||
Sbjct 268435 GAGGGTCTCCACACTGACTTCGCTTG 268460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151380903781688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |