Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq876 120 7e-22 seq510 102 2e-16 >seq876 Length=62397 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || |||||||| ||||||||||| || || || | |||||| Sbjct 15284 AAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTC 15343 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| ||||| || || | | ||| ||||||||||| || || || || || Sbjct 15344 CTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTGTC 15403 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| | ||||| || || | ||||| || | || ||||| || || || || Sbjct 15404 CTGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACCTCAAGGGTGATGGT 15463 Query 104527 CTTACCAGT 104535 ||| ||||| Sbjct 15464 CTTGCCAGT 15472 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | ||| ||||||||||||||||| |||||| Sbjct 14980 ATACCACCACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCA 15039 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | |||||||| || || || || || || || || | ||| || || ||| Sbjct 15040 GAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGA 15099 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || || || ||||| | || ||||| || | ||| ||| | || Sbjct 15100 GGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCG 15159 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 ||||| || ||||| ||||| || || || || || || Sbjct 15160 ACCTCGAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 15197 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| ||||||||||| ||||| | ||||| || || ||||| ||| Sbjct 14557 GTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCAAGCTGTTTGCCA 14616 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| ||||||||||| || || || || || || ||||| | || Sbjct 14617 GCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTC 14676 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| | || ||||| || || || || || || || || || Sbjct 14677 ACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTC 14736 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 14737 TTGACGAAAATCTGCAT 14753 Score = 107 bits (118), Expect = 4e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | |||||||||||| || ||||| || || Sbjct 14752 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCC 14811 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||| || || || || || || || || | ||| || |||||| Sbjct 14812 GAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 14871 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGT-T 104507 || || || || |||||||| ||| ||||| || || || || | ||||| || | | Sbjct 14872 GGAATGCCCTCCTTATCCTGGATC-TTGCTCTTGACGTTGTCAATAGTATC-TGAGCTCT 14929 Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || || || || ||||| || || || || || || || |||||||| Sbjct 14930 CGACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 >seq510 Length=829487 Score = 102 bits (112), Expect = 2e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| || |||||||| || ||||| ||||| || || || |||||| | ||||| ||| Sbjct 268315 GTTGCATTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTTGCCTCCATCTTCTGG 268374 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | ||||| ||||| || | |||||||| ||||| |||| | ||| Sbjct 268375 CTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAC 268434 Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283 || ||| | ||| ||||||||||| Sbjct 268435 GAGGGTCTCCACACTGACTTCGCTTG 268460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151380903781688