Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq600 154 2e-32 seq510 116 5e-21 >seq600 Length=572387 Score = 154 bits (170), Expect = 2e-32 Identities = 673/1053 (64%), Gaps = 24/1053 (2%) Strand=Plus/Minus Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 324608 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 324549 Query 63051 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT 63109 |||| || | ||| || | ||||| | || ||||||| || | || | | | Sbjct 324548 TGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGACCACGG 324492 Query 63110 TTCTCTT--TCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165 ||||| ||||| | | ||| | | |||||||| || || | |||| ||| Sbjct 324491 CCCTCTTGCTCGTACTTGGCGTAGAGAGCA--TCGAACTCATCACCATAGACATCAGCCA 324434 Query 63166 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63225 ||| || ||| | || || | | | ||| || |||| ||| || || |||| Sbjct 324433 GTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCA 324374 Query 63226 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63285 | |||||||| || |||| | ||| || || || | || | | ||||| || | Sbjct 324373 TGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTAC 324314 Query 63286 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63345 | ||||| |||||||||||| | | | ||| | |||||||| |||| ||| | Sbjct 324313 CGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGA 324254 Query 63346 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63405 |||| | | ||||| || ||||| || ||||| || | ||| | |||||||| ||| Sbjct 324253 TGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAA 324194 Query 63406 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTC 63465 | || | | ||| |||| |||||||| || ||| ||||| || || || | Sbjct 324193 ACACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGGTTCCACCAATGTAAGAAC 324134 Query 63466 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 | | || ||||| | ||||| || || || || | || ||||| | | Sbjct 324133 CGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCAGTCTTGGAGATCATGG 324074 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGT----TAAGT 63581 | || || | ||||||||||||||||| ||||| || || ||| || ||| Sbjct 324073 CACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGA 324014 Query 63582 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63641 || || || || ||| | | ||| | ||||| || | || || || ||| Sbjct 324013 AGCAAGATGCAAG----CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCG 323958 Query 63642 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63701 || || || | || | || | | | ||| |||||||| || || || ||| Sbjct 323957 TGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCG 323898 Query 63702 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63761 |||||||| || || |||||||| | || |||||| || | ||| | | || | Sbjct 323897 CCGTGAATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTTCCG 323838 Query 63762 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63821 || || | | ||| || || | || || || || || ||||||| ||| Sbjct 323837 TTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAG 323778 Query 63822 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATG 63881 || || ||||| | ||| | |||||||| | || || || |||| || | | | Sbjct 323777 TCACGGTCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTA 323719 Query 63882 GTGATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63940 ||| | | |||| || || |||| | | || || || || || ||||||| | | | Sbjct 323718 GTGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAGTGGTAGAG 323659 Query 63941 ATCCTCCATCAC--TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 63998 ||| || || || | ||| | ||||| |||| |||||| || || || ||||| Sbjct 323658 ATCGGAGATGACCATTGA--GAATTGCTTTTTAGTTTGCTTGTGGAGGTTGGAAACGGCG 323601 Query 63999 ATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031 || | || || |||||||| || || || ||| Sbjct 323600 ATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 323568 >seq510 Length=829487 Score = 116 bits (128), Expect = 5e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| || ||| ||||||||||| | | || || |||||||| Sbjct 268469 AACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 268410 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 268409 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 268350 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || || || |||| Sbjct 268349 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 268316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622937964807760