Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq876 89.7 4e-13 seq397 89.7 4e-13 >seq876 Length=62397 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 || ||||| | |||||| |||| |||||| | |||||||||||| | || || Sbjct 15185 ACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCGACAATGTGAAGTCC 15126 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| || ||||| |||||||| || ||| | || || | || ||||||| Sbjct 15125 AAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTTATCTTCGCCGGCAAG 15066 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACA 24188 || || ||||| | | | | | | || || || ||||| |||||||| ||| Sbjct 15065 CAGCTTGAAGACGGCCGCACCCTTTCTGACTACAATATTCAGAAAGAATCGACA 15012 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || |||| ||||| | || || ||||||||||| | Sbjct 14981 ATGCAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 14922 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | ||||| ||||| || || || ||||| ||||| || || Sbjct 14921 GATACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 14862 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||||||||| || ||||||| | | | || ||||| || Sbjct 14861 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 14802 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || ||||||||||||||| |||| Sbjct 14801 ATCCAAAAAGAATCTACACTTCA 14779 >seq397 Length=203225 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 |||||| |||| |||||| | | |||||||||||| | ||||| ||||| || Sbjct 149148 ATTACCCTCGATGTCGAGTCGAGCGACACCATCGACAACGTCAAGACCAAGATCCAGGAT 149089 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || || || ||| | ||||| | || ||||||||| ||||| ||| Sbjct 149088 AAGGAGGGCATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAT 149029 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | | | | | ||||| || ||||| || || Sbjct 149028 GGCCGCACCCTGAGCGACTACAACATCCAGAA 148997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429929785543830