Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq600 136 5e-27 seq510 111 2e-19 >seq600 Length=572387 Score = 136 bits (150), Expect = 5e-27 Identities = 680/1071 (63%), Gaps = 24/1071 (2%) Strand=Plus/Minus Query 62828 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 62887 ||||| || | || | || |||||||| ||||| || |||||||| || || ||||| Sbjct 324626 ATGGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 324567 Query 62888 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 62946 || ||||||| ||| |||||| || | ||| || | ||||| | || ||||||| || Sbjct 324566 GGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGAT 324508 Query 62947 TATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACAATCGTTCGAACTCGT 63002 | || | | | ||||| ||||| | | ||| | | |||||||| | Sbjct 324507 GGTC--TTGCGACCACGGCCCTCTTGCTCGTACTTGGCGTAGAGAGCA--TCGAACTCAT 324452 Query 63003 CTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63062 | || | |||| ||||||| || ||| | || || | | | ||| || |||| Sbjct 324451 CACCATAGACATCAGCCAGTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGT 324392 Query 63063 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 63122 ||| || || ||||| |||||||| || |||| | ||| || || || | || Sbjct 324391 TGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGG 324332 Query 63123 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63182 | | ||||| || || ||||| |||||||||||| | | | ||| | | Sbjct 324331 CACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGT 324272 Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242 ||||||| |||| ||| ||||| | | ||||| || ||||| || ||||| || | || Sbjct 324271 GCCACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGT 324212 Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 63302 | | |||||||| ||| | || | | ||| |||| ||||| ||||| | ||| |||| Sbjct 324211 AGCGTGCGGTGTTGTTAAACACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGG 324152 Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63362 | || || || || | || ||||| | ||||| || || || | Sbjct 324151 TTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAG 324092 Query 63363 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 63422 | | || ||||| | || || || | || |||||||| ||||| || || || Sbjct 324091 CAGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCCG 324032 Query 63423 CCATCATGT----TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 63478 | ||| || ||| || || || || ||| | | ||| | ||||| Sbjct 324031 CGCTCACGTCGACCAAGAAGCAAGATGCAAG----CTGGGGTTGGGGAGTAGCGGCATTG 323976 Query 63479 AATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 63538 || | || || || |||||||| || | || | || | | | ||| |||||||| Sbjct 323975 AACAGAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATG 323916 Query 63539 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63598 || || || ||| |||||||| || || |||||||| | || |||||| || Sbjct 323915 GCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGA 323856 Query 63599 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63658 | ||| | | || ||| || | | ||| || || | || || || || Sbjct 323855 CGCTCAGCAACATTTCCGTTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCG 323796 Query 63659 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATAT 63718 || ||||||| ||||| || ||||| | ||| | |||||||| | || || Sbjct 323795 AAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGC 323736 Query 63719 TTGTTAACTACATCCATGGTAATAC-TTGAAATAATAGGAAAATGTTTCCCATTTTTAGG 63777 || |||| | | | | || | | |||| || |||||| | | || || || || Sbjct 323735 TTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGG 323677 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCAC--TTCACTAAATAGtttttttGTTTCTTTG 63835 || ||||||| | | | ||| || || || | ||| | ||||| |||| ||| Sbjct 323676 GTTCACATAGTGGTAGAGATCGGAGATGACCATTGA--GAATTGCTTTTTAGTTTGCTTG 323619 Query 63836 TGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 || || || || ||||| || | || || |||||||| || || || ||| Sbjct 323618 TGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 323568 >seq510 Length=829487 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 268469 AACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 268410 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| ||| Sbjct 268409 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 268350 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 || ||||| || || || || || || || |||| Sbjct 268349 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 268316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633622606405600