Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq876 105 6e-18
>seq876
Length=62397
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| ||||||| || |||| || |||| || |||||||| ||||| |||||
Sbjct 15197 GTTAAGACCCTGACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCGAC 15138
Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130
||||| || ||| ||||| || || ||||| || ||||| ||||| ||||
Sbjct 15137 AATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTTATC 15078
Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190
|| |||||||| || | ||||| | ||||| | || ||||||||||| ||||||
Sbjct 15077 TTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCTGACTACAATATTCAGAAAGAA 15018
Query 25191 TCCACGCTACA 25201
|| || || ||
Sbjct 15017 TCGACACTCCA 15007
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || | ||||| ||||||| ||| ||
Sbjct 14981 ATGCAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 14922
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| ||||| || | ||| || ||| || || || || ||||| ||||||||
Sbjct 14921 GATACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 14862
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| |||| || |||||||| || | ||||||| || ||| | |||||||||
Sbjct 14861 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 14802
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| ||||||||||| || || ||
Sbjct 14801 ATCCAAAAAGAATCTACACTTCA 14779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433321736514590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |