Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq876 105 6e-18 >seq876 Length=62397 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| ||||||| || |||| || |||| || |||||||| ||||| ||||| Sbjct 15197 GTTAAGACCCTGACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCGAC 15138 Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130 ||||| || ||| ||||| || || ||||| || ||||| ||||| |||| Sbjct 15137 AATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTTATC 15078 Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190 || |||||||| || | ||||| | ||||| | || ||||||||||| |||||| Sbjct 15077 TTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCTGACTACAATATTCAGAAAGAA 15018 Query 25191 TCCACGCTACA 25201 || || || || Sbjct 15017 TCGACACTCCA 15007 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | ||||| ||||||| ||| || Sbjct 14981 ATGCAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 14922 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || ||||| || | ||| || ||| || || || || ||||| |||||||| Sbjct 14921 GATACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 14862 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || |||||||| || | ||||||| || ||| | ||||||||| Sbjct 14861 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 14802 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || ||||||||||| || || || Sbjct 14801 ATCCAAAAAGAATCTACACTTCA 14779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433321736514590