Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq876 116 3e-21 seq784 93.3 4e-14 >seq876 Length=62397 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || ||||||| || || |||| || ||||| || | | | Sbjct 14981 ATGCAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 14922 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || || || |||||||| ||||| || || || Sbjct 14921 GATACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 14862 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | || ||| ||| || |||| |||||||| Sbjct 14861 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 14802 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||||||||| || Sbjct 14801 ATCCAAAAAGAATCTAC 14785 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| ||||| |||| ||||| || || || || Sbjct 14753 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCC 14694 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || |||||||||||||| || || || ||||| Sbjct 14693 GACACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCTGATCAG 14634 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||||||| | ||||| ||| || | || || || ||| Sbjct 14633 CAGCGCTTGATCTTCGCTGGCAAACAGCTTGAGGACGGCCGTACTCTTTCTGACTATAAC 14574 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || ||||| | || | || ||||| |||| || || Sbjct 14573 ATTCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGG 14527 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| || | ||||| || || | || || || || || | |||| ||| | ||| Sbjct 15197 GTTAAGACCCTGACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCGAC 15138 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || | || || || |||||||||||||| ||||| ||||| || || || ||||| Sbjct 15137 AATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTTATC 15078 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| ||| | || || ||||||| | || || ||||| ||||| |||||| Sbjct 15077 TTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCTGACTACAATATTCAGAAAGAA 15018 Query 22411 TCCAC 22415 || || Sbjct 15017 TCGAC 15013 >seq784 Length=190714 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || || || || || || || |||||||| ||| | || Sbjct 31188 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 31129 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| | || ||||||||||| ||||| || || ||| Sbjct 31128 GGATGGCCGCACTCTTTCTGATTACAACATCCAAAAGGAGTCGACC 31083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721933094090