Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq876 116 3e-21
seq784 93.3 4e-14
>seq876
Length=62397
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || ||||||| || || |||| || ||||| || | | |
Sbjct 14981 ATGCAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 14922
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | |||| || || || || |||||||| ||||| || || ||
Sbjct 14921 GATACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 14862
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || |||||||| ||| | || ||| ||| || |||| ||||||||
Sbjct 14861 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 14802
Query 22399 ATTCAAAAAGAATCCAC 22415
|| ||||||||||| ||
Sbjct 14801 ATCCAAAAAGAATCTAC 14785
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| ||||| |||| ||||| || || || ||
Sbjct 14753 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCC 14694
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || |||||||||||||| || || || |||||
Sbjct 14693 GACACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCTGATCAG 14634
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||||||| | ||||| ||| || | || || || |||
Sbjct 14633 CAGCGCTTGATCTTCGCTGGCAAACAGCTTGAGGACGGCCGTACTCTTTCTGACTATAAC 14574
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || ||||| | || | || ||||| |||| || ||
Sbjct 14573 ATTCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGG 14527
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290
||||| || | ||||| || || | || || || || || | |||| ||| | |||
Sbjct 15197 GTTAAGACCCTGACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCGAC 15138
Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350
|| | || || || |||||||||||||| ||||| ||||| || || || |||||
Sbjct 15137 AATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTTATC 15078
Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410
|| |||||||| ||| | || || ||||||| | || || ||||| ||||| ||||||
Sbjct 15077 TTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCTGACTACAATATTCAGAAAGAA 15018
Query 22411 TCCAC 22415
|| ||
Sbjct 15017 TCGAC 15013
>seq784
Length=190714
Score = 93.3 bits (102), Expect = 4e-14
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||||||||| || || || || || || || || |||||||| ||| | ||
Sbjct 31188 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 31129
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
|||| |||||| | || ||||||||||| ||||| || || |||
Sbjct 31128 GGATGGCCGCACTCTTTCTGATTACAACATCCAAAAGGAGTCGACC 31083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419721933094090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |