Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq510 143 5e-29
seq1112 107 4e-18
seq600 84.2 4e-11
>seq510
Length=829487
Score = 143 bits (158), Expect = 5e-29
Identities = 297/435 (68%), Gaps = 14/435 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| |
Sbjct 268727 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCA 268668
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | ||| | || || || || | | ||| || || || ||||| |
Sbjct 268667 GCGTTGTAGTACTTCTTGTTACCGAGGGCCACCAGCAGGCGATCAGCAACGAACTCAATG 268608
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|||| | |||||| | ||||||||||||| || || || |||| || ||| | |
Sbjct 268607 TACTCGCACATCAGCTTCGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTCAGG 268548
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT--GTGCCAGAG 251797
|| |||| ||| || | || ||||| | | ||| ||| |||| | | | | |
Sbjct 268547 AACTCCTGCTCGATGCCGACGGCCTCGACAATAATATCCTGAACAACCTTAGGGTCGGGG 268488
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTC 251855
| | ||| || | ||| |||| | || || || | || ||| ||||||||
Sbjct 268487 --CGGTGGTT---CATGTGAGAGAACAGCAGGCAAGCGAAGTCAGT--GTGGAGACCCTC 268435
Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915
||| ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | ||
Sbjct 268434 GTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAG 268375
Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975
||||||||| | | ||| || |||||||| | | |||||||||| | |||||||
Sbjct 268374 CCAGAAGATGGAGGCAAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAATGCAAC 268315
Query 251976 AAGGCGCTCAGCAAA 251990
|| ||| ||| ||
Sbjct 268314 CAGACGCGAAGCGAA 268300
>seq1112
Length=75763
Score = 107 bits (118), Expect = 4e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403
||||| || || || |||| |||||| || || || |||| ||||||||||| ||
Sbjct 42591 AGGTGTAGACCTTTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAA 42532
Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
| || | ||| | ||||||||||| | || || |||||| |||||||||| || |
Sbjct 42531 CCAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGTCCCAACGGTTC 42472
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|| |||| ||| || ||||| || || |||| ||||| || || || || ||
Sbjct 42471 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGCTTCCCCAAGAA 42412
Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||| | ||| || || || |||||||| |||||||
Sbjct 42411 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 42370
>seq600
Length=572387
Score = 84.2 bits (92), Expect = 4e-11
Identities = 266/410 (65%), Gaps = 3/410 (1%)
Strand=Plus/Minus
Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153
||||| ||| ||||||| ||| || | ||| | || | ||||| ||||||| |||
Sbjct 324491 CCCTCTTGCTCGTACTTGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGT 324432
Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213
|| ||| |||| |||| | || | ||| | | | | ||| ||||||||||||
Sbjct 324431 CCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATG 324372
Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273
|| ||||| | ||||| ||||| |||| || ||||| || | ||||| |||
Sbjct 324371 AAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTACCG 324312
Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333
|| || || || ||||| || | || |||| || || ||||| || |
Sbjct 324311 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATG 324252
Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390
||||||| ||| | || || ||||||| ||||| | ||| ||| ||||
Sbjct 324251 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAAC 324192
Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450
|| ||||| || ||||| || | ||| ||| |||||||| | ||| | || |||
Sbjct 324191 ACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGGTTCCACCAATGTAAGAACCG 324132
Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500
|||||||| | | || ||||| || || || || ||||||
Sbjct 324131 GTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCAGTCTTGGA 324082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027821181377426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |