Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq510 143 5e-29 seq1112 107 4e-18 seq600 84.2 4e-11 >seq510 Length=829487 Score = 143 bits (158), Expect = 5e-29 Identities = 297/435 (68%), Gaps = 14/435 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| | Sbjct 268727 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCA 268668 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | || || || || | | ||| || || || ||||| | Sbjct 268667 GCGTTGTAGTACTTCTTGTTACCGAGGGCCACCAGCAGGCGATCAGCAACGAACTCAATG 268608 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | |||||| | ||||||||||||| || || || |||| || ||| | | Sbjct 268607 TACTCGCACATCAGCTTCGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTCAGG 268548 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT--GTGCCAGAG 251797 || |||| ||| || | || ||||| | | ||| ||| |||| | | | | | Sbjct 268547 AACTCCTGCTCGATGCCGACGGCCTCGACAATAATATCCTGAACAACCTTAGGGTCGGGG 268488 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTC 251855 | | ||| || | ||| |||| | || || || | || ||| |||||||| Sbjct 268487 --CGGTGGTT---CATGTGAGAGAACAGCAGGCAAGCGAAGTCAGT--GTGGAGACCCTC 268435 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | || Sbjct 268434 GTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAG 268375 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975 ||||||||| | | ||| || |||||||| | | |||||||||| | ||||||| Sbjct 268374 CCAGAAGATGGAGGCAAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAATGCAAC 268315 Query 251976 AAGGCGCTCAGCAAA 251990 || ||| ||| || Sbjct 268314 CAGACGCGAAGCGAA 268300 >seq1112 Length=75763 Score = 107 bits (118), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||||| || || || |||| |||||| || || || |||| ||||||||||| || Sbjct 42591 AGGTGTAGACCTTTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAA 42532 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | ||||||||||| | || || |||||| |||||||||| || | Sbjct 42531 CCAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGTCCCAACGGTTC 42472 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| ||| || ||||| || || |||| ||||| || || || || || Sbjct 42471 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGCTTCCCCAAGAA 42412 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 42411 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 42370 >seq600 Length=572387 Score = 84.2 bits (92), Expect = 4e-11 Identities = 266/410 (65%), Gaps = 3/410 (1%) Strand=Plus/Minus Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153 ||||| ||| ||||||| ||| || | ||| | || | ||||| ||||||| ||| Sbjct 324491 CCCTCTTGCTCGTACTTGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGT 324432 Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213 || ||| |||| |||| | || | ||| | | | | ||| |||||||||||| Sbjct 324431 CCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATG 324372 Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273 || ||||| | ||||| ||||| |||| || ||||| || | ||||| ||| Sbjct 324371 AAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTACCG 324312 Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333 || || || || ||||| || | || |||| || || ||||| || | Sbjct 324311 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATG 324252 Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390 ||||||| ||| | || || ||||||| ||||| | ||| ||| |||| Sbjct 324251 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAAC 324192 Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450 || ||||| || ||||| || | ||| ||| |||||||| | ||| | || ||| Sbjct 324191 ACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGGTTCCACCAATGTAAGAACCG 324132 Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500 |||||||| | | || ||||| || || || || |||||| Sbjct 324131 GTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCAGTCTTGGA 324082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027821181377426