Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq876 152 9e-32 seq510 152 9e-32 seq397 129 1e-24 seq1112 120 6e-22 seq784 95.1 2e-14 >seq876 Length=62397 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||| ||| || |||||||| || || |||||||| || || Sbjct 14527 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAA 14586 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||| || || ||||| || | | || || || || || Sbjct 14587 AGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGG 14646 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | ||| ||| ||||||||||| | || || || Sbjct 14647 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACC 14706 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| |||||||| || |||||||||||||| |||||||| Sbjct 14707 TCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || || ||||||||||| || ||||| ||| Sbjct 14755 CCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAG 14814 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| |||||||| || || | || ||||| || ||| Sbjct 14815 AGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 14874 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || || ||||| ||||||| || || || |||| || ||| Sbjct 14875 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCAATAGTATCTGAGCTCTCGACT 14934 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| || |||||||||||||| |||||||| Sbjct 14935 TCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 Score = 140 bits (154), Expect = 6e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || || ||||| || || || || || || Sbjct 14983 CCACCACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGAA 15042 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| || || | || |||||||| ||| Sbjct 15043 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGA 15102 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | ||| || ||||||||||| | || || || Sbjct 15103 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 15162 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||| ||||| ||||| || |||||||| |||| Sbjct 15163 TCGAGGGTAATGGTCTTTCCGGTCAGGGTCTTAACGA 15199 Score = 104 bits (114), Expect = 4e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || ||||||||||| ||||| ||||| || || Sbjct 15270 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAA 15329 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||| || || ||||| || | || || || || || || Sbjct 15330 AGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 15389 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| ||| ||||| || || || || || Sbjct 15390 ATCCCCTCCTTGTCCTGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACC 15449 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 15450 TCAAGGGTGATGGTCTTGCCAGTGA 15474 >seq510 Length=829487 Score = 152 bits (168), Expect = 9e-32 Identities = 300/441 (68%), Gaps = 12/441 (3%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 268764 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 268705 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| | ||| | | ||| || ||| Sbjct 268704 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGCGTTGTAGTACTTCTTGTTACC 268645 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||| ||||| |||||||| ||||||| || |||||| | |||||| Sbjct 268644 GAGGGCCACCAGCAGGCGATCAGCAACGAACTCAATGTACTCGCACATCAGCTTCGAGTT 268585 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | |||||| | ||||| | ||| |||| ||| || |||| | Sbjct 268584 CATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGG- 268526 Query 10175 TTCCTCGACGATGCT---CTTTACCACGTCAAG---GGACAGCTTGTTCTCGAGCTTCGA 10228 ||||||| || | || || || | | | || | | |||| | | || Sbjct 268525 --CCTCGACAATAATATCCTGAACAACCTTAGGGTCGGGGCGGTGGTTC---ATGTGAGA 268471 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 |||| || | || | |||||| |||||||| || ||| | ||||||||| Sbjct 268470 GAACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGA 268411 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 ||| ||||| ||||| || || || || ||||||||| |||| | || || || Sbjct 268410 GAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCC 268351 Query 10349 GGAGAACAGAAGACCCTCCAC 10369 ||||| | | |||||| || Sbjct 268350 AGAGAAGAAGATACCCTCGAC 268330 >seq397 Length=203225 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 148997 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 149056 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| ||||| || || ||||| | ||||||| ||| Sbjct 149057 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 149116 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 149117 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 149175 >seq1112 Length=75763 Score = 120 bits (132), Expect = 6e-22 Identities = 476/734 (65%), Gaps = 34/734 (5%) Strand=Plus/Plus Query 225280 ACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGGTCGTA 225339 |||||| ||||| |||||||||||||||| ||| || | | | | || ||||| Sbjct 41880 ACCCTCAAGGAAACCGGGCTCGGGGAACTTGAACTCCATCTCGGAGGCACCGAGCTCGTA 41939 Query 225340 GTAAGATGCAGCCTCGGGTCGCT--TTGCCACGAAAGCAGACAGGTTTCCGAGGT-GCTT 225396 ||| || ||| |||| ||| ||| ||||| | || ||| | ||| ||| | Sbjct 41940 GTAGGACTTAGCAGCGGGGTGCTGCTTG--ACGAACTCGGAGAGGGTACCGCGGTAACGG 41997 Query 225397 CGTGAGCTTGAGGTTCTTCTCGTAATGAACAA-TTGCCGAGCACACTGCGTCAAGGAAGC 225455 || |||||||| | |||||| || |||| ||| | | || ||||||||| Sbjct 41998 CG-GAGCTTGAAG---CGCTCGTAGTGGACAACGTGCTG-GATGACGTTGTCAAGGAACT 42052 Query 225456 CAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGGTGCGTGATG 225514 |||||||| ||||| |||||||| | ||| | | | || |||||||| | | Sbjct 42053 TGGAGTCGTGAGACACCATGATGGAGGTACAAG---GGGA-GCTCTTGAGGTAGTTCTCG 42108 Query 225515 AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCA 225574 |||||||| ||||| ||||||||| |||||| ||||| ||||| || || || || || Sbjct 42109 AGCCATGCGACGTTCTTGACGTCCAAGTGGTTGGTAGGCTCGTCGAGCAGGAGAATATCG 42168 Query 225575 GCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAG 225634 | || || || || ||||| |||||||| ||||| || ||||| |||| Sbjct 42169 GGGCTCTCGAAGACAGCACGGCAGAGAGCGAGCTTCATCTTCCAACCACCGGAAAGGGCA 42228 Query 225635 CCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCGTCTGGATAATG 225694 ||| | | | | || ||| || ||| |||| |||| || | | Sbjct 42229 GTGATGGGACCCTGGATCTGGAACTCGGAGAAACCGAACTCGTTGAGCAGCTTGCTCTCA 42288 Query 225695 CGCTC------GGGAGAG--CTG-CGA---GCGGCAACGTTGGGGTCGGACGAGAGGTAA 225742 |||| ||||| | ||| | | | |||| || | || | ||| || Sbjct 42289 AGCTCCTCACGGGGAGGGTTCTGTCCAACCTCAGCAAGCTTCTTCTGGGTC--CAGGCAA 42346 Query 225743 TCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGG 225802 | |||||| || | | | | ||| | ||||| || ||||| || ||| | Sbjct 42347 T----GACGGTCTGCTCAGTATCGGCAGAGTCGAGATCGTGCTCGACGTAGACGGTCTTG 42402 Query 225803 AGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTA 225862 | || | | |||||||||||| ||||| | || || ||||| | ||||| Sbjct 42403 ACCTCATCCTTCTTGGGGAAGCCCTCGAGCTGCTCGTTGTTGATAGCACGCATGAGGGTG 42462 Query 225863 CTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGG 225922 |||| || | ||||||||||||| ||| |||||| | | || ||||||| | ||| Sbjct 42463 GTCTTTCCGGAACCGTTGGGACCGAGGAGACCGTAACGCTGGCCACGCTTGAGGCGCAGG 42522 Query 225923 CGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGG 225982 | || |||||| || |||||| |||| || || |||||||| ||| | ||| ||| Sbjct 42523 TGAGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCCAGGGAGAAAGTGCAGTTGCAAAGG 42582 Query 225983 TCCTCACCCTCCTC 225996 || |||| ||||| Sbjct 42583 TCTACACCTTCCTC 42596 >seq784 Length=190714 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| ||||||||||| ||||| || Sbjct 31054 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGAA 31113 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || ||||| || ||| Sbjct 31114 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 31173 Query 68355 ATGCCTTCCTTGTCT 68369 || || ||||||||| Sbjct 31174 ATACCCTCCTTGTCT 31188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921608736947920