Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq876 140 8e-28 seq397 111 4e-19 >seq876 Length=62397 Score = 140 bits (154), Expect = 8e-28 Identities = 172/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || ||||||||||||||| || || | | Sbjct 14755 CCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAG 14814 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | || || || |||||||| || ||||| || | || Sbjct 14815 AGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 14874 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || || || ||||||||||| || ||| || ||||| || |||| ||| |||| || Sbjct 14875 ATGCCCTCCTTATCCTGGATCTT-GCTCTTGACGTTGTCAATAGTATCTGAGCTC---TC 14930 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 14931 GACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | ||| || || || | ||| ||||| |||||||||||||| | Sbjct 15270 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAA 15329 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | ||||| || |||||||||| ||||| ||| | ||| Sbjct 15330 AGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 15389 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || |||| ||| || || || || Sbjct 15390 ATCCCCTCCTTGTCCTGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACC 15449 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| || || Sbjct 15450 TCAAGGGTGATGGTCTTGCCAGT 15472 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| | || || || ||||| || | ||||| || |||||| Sbjct 14563 TCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAG 14622 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||| ||| | ||||| || || || || ||||| || | |||||||| Sbjct 14623 ATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTA 14682 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || |||||||| || || |||||||| ||||||||| Sbjct 14683 TCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACG 14742 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 14743 AAAATCTGCAT 14753 >seq397 Length=203225 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 148997 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 149056 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || | || || || || ||||||||||| || | || ||||| || Sbjct 149057 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 149116 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 149117 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 149175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179636474414108