Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq876 122 8e-23 seq397 98.7 9e-16 seq510 96.9 3e-15 >seq876 Length=62397 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||| || | || ||||| || ||||| || || || | || || Sbjct 14539 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCG 14598 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| |||||| ||||||| ||||||||||| ||||| |||||||||||| Sbjct 14599 TCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTG 14658 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || ||| | | |||| |||||| | |||||| || | || | Sbjct 14659 TCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATT 14718 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||||||| || || || ||||||||||| Sbjct 14719 GTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| |||||||| ||||||||||| | || || ||| || ||||| || || Sbjct 14785 GTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTGCTTGCCG 14844 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || |||| Sbjct 14845 GCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGCTCTTG 14904 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | || || | ||||||||||||| || | || || ||||| || || Sbjct 14905 ACGTTG-TCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTCTTTCCGGTTAGGGT 14963 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 14964 CTTGACGAAAATCTGCAT 14981 Score = 104 bits (114), Expect = 2e-17 Identities = 100/127 (79%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || ||||| || || | ||||||| || || |||||||| ||| Sbjct 15300 GTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCCTCAAGCTGTTTGCCA 15359 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||||||||||||| ||||| || |||||||||||| ||| ||| ||| Sbjct 15360 GCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGACTTT 15419 Query 127037 A-GTTGT 127042 | ||||| Sbjct 15420 ACGTTGT 15426 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||| ||||||||||| || | ||||| || || ||||| || || Sbjct 15013 GTCGATTCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCG 15072 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| |||||||| |||||||||||||| ||| || ||| Sbjct 15073 GCGAAGATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTC 15132 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| |||| ||| | || || |||||||| || Sbjct 15133 ACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTTCCGGTCAGGGTC 15192 Query 127097 TTTAC 127101 || || Sbjct 15193 TTAAC 15197 >seq397 Length=203225 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || || ||| ||||| Sbjct 148997 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 149056 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| || || || ||||||||||| ||| ||| || ||||| |||| || Sbjct 149057 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTG-TC 149115 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 149116 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 149175 Query 127105 A 127105 | Sbjct 149176 A 149176 >seq510 Length=829487 Score = 96.9 bits (106), Expect = 3e-15 Identities = 295/452 (65%), Gaps = 27/452 (6%) Strand=Plus/Plus Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198 ||| || | || |||||| |||||||| |||||||||| ||| ||||| | || Sbjct 268309 CGTCTGGTTGCATTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTTGCCTCCATC 268368 Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258 || | |||| | || | ||||| || ||||| || ||||||||| ||||| Sbjct 268369 TTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCT 268428 Query 47259 AGAGACGAAGGCCTGCACACCAACTT----TGCCTG----TCTCT-ACTACAACACTAGA 47309 | ||||| || || ||||| |||| |||||| ||||| || ||| | Sbjct 268429 CGTGACGAGGGTCTCCACACTGACTTCGCTTGCCTGCTGTTCTCTCACATGAACCACCGC 268488 Query 47310 GTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATT 47369 ||| | ||| | | |||| || || ||| ||| ||||||| ||| Sbjct 268489 CCCGACCCTAAGGTTGT-----------TCAG-GATATTATTGTCGAGGCCGTCGGCATC 268536 Query 47370 GAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATG 47429 ||| |||||| | | || ||||| ||| | | | || |||||| || || || Sbjct 268537 GAGCAGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCGAAGCTG 268596 Query 47430 ATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAG 47489 ||| | ||||||| || || || || || |||||||| || || ||| | ||| Sbjct 268597 ATGTGCGAGTACATTGAGTTCGTTGCTGATCGCCTGCTGGTGGCCCTCG-GTAAC--AAG 268653 Query 47490 ATTTACCACACCGAG---AATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAG 47546 | ||| ||| || || || ||||| || ||| | ||| || || | |||||| Sbjct 268654 AAGTACTACAACGCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAG 268713 Query 47547 ACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||||||| ||||||||||| ||||| || || Sbjct 268714 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 268745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475493750700640