Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq600 167 3e-36 seq510 132 6e-26 >seq600 Length=572387 Score = 167 bits (184), Expect = 3e-36 Identities = 563/866 (65%), Gaps = 17/866 (2%) Strand=Plus/Minus Query 116423 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 116482 |||| ||||||| || || || || || |||| |||||| || ||||||| | Sbjct 324715 TAGGGAGGGCGAGGGAAGCAAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCAA 324656 Query 116483 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 116542 || || || |||| || || || |||||| |||| |||||| || || ||| Sbjct 324655 CGATCTCGGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTACTCTTCT 324596 Query 116543 TGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 116602 |||| || ||||||||||||||||| | || | || ||||| || || | || ||||| Sbjct 324595 TGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAA 324536 Query 116603 TAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCCCCTCCTCCTCG 116658 | || | ||| | | || | | || | ||| ||| | || ||||| | |||| Sbjct 324535 TGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGACCACGGCCCTCTTGCTCG 324480 Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTT 116717 ||||| | |||||| || || ||||| ||| ||| || | || | || || || || | Sbjct 324479 TACTTGGCGTAGAGAGCATCGAACTCATCA-CCATAGACATCAGCCAGTCCGGGGGCTTC 324421 Query 116718 ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 116777 | || |||||||| | ||| | ||| ||||||| |||||||||||||| || || Sbjct 324420 GTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGG 324361 Query 116778 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 116837 | |||| | || |||| || || || ||| | || || | || || || || Sbjct 324360 GGTCCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCG 324301 Query 116838 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 116897 || || | || || | || ||| ||||||||||| |||||||| | || | | || Sbjct 324300 CAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACC 324241 Query 116898 CTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCAT 116954 ||| |||| |||||| || || | || || |||||| || || ||||| Sbjct 324240 AGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAACACACGGAGCAT 324181 Query 116955 TGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGAC 117014 |||| |||||| | || || || || || | ||| ||| | | || | | Sbjct 324180 GGGAACGATACCGTTGGAGGAACCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 324121 Query 117015 ATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074 ||||| || || ||| ||||| || || ||| ||||| || || | |||| Sbjct 324120 GCGGTGGACGTTCAGACCGATACCGCCAGCAGTCTTGGAGATCATGGCACAGGTCTTGAG 324061 Query 117075 ACTGCCGTAGATCCCATCGATCGAGT-CACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133 | || | ||||| || || || || | | || | | ||| | |||||| | | Sbjct 324060 AGTGTCATAGATACCCTCAATGCTGTCCGCGCTCACGT-CGACCAAGAAGCAAGATGCAA 324002 Query 117134 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT- 117192 || || || ||| | || ||||| || || || | ||||| |||| ||| | Sbjct 324001 GCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAA-GTACTTC 323943 Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252 ||||||||| | ||| ||||| | | | |||||| || |||||||| |||| Sbjct 323942 TGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACA 323883 Query 117253 GAGACCCGCATAAACATGTATTGGGG 117278 | || ||||| | || || ||||| Sbjct 323882 GCAACACGCATGAGCAAGTGCTGGGG 323857 >seq510 Length=829487 Score = 132 bits (146), Expect = 6e-26 Identities = 301/451 (67%), Gaps = 24/451 (5%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||| Sbjct 268746 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 268687 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCC----CAATCTGTTTGAG 127344 || || || ||||| | ||| | | || ||| ||| | | | || Sbjct 268686 GAAGTCGAAGGGGTTGGCAGCGTTGTAGTACTTCTTGTTACCGAGGGCCACC------AG 268633 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || ||||| | ||| ||||||||||||| ||||| || |||||||| || | || Sbjct 268632 CAGGCGATCAGCAACGAACTCAATGTACTCGCACATCAGCTTCGAGTTCATGCCAAGCAG 268573 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 || || || ||||| | |||| ||| ||| ||| | || || || | || Sbjct 268572 ACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAATAAT 268513 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGA-AGAGTTCCACAG--- 127520 | |||| | ||| ||| ||| || || |||| | ||| Sbjct 268512 ATCCTGAACA------ACCTTAGGGTCGGGGCGGTGGTTCATGTGAGAGAACAGCAGGCA 268459 Query 127521 --CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 | || || |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct 268458 AGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACC 268399 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| || || |||||||||| |||||| || | ||||||||||||||||||||| Sbjct 268398 AGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCAGAGAAGAAGAT 268339 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGC 127669 ||||| ||| ||||| |||| |||||| Sbjct 268338 ACCCTCGACAGCGGCGAATGCAACCAGACGC 268308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613498104755760