Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq397 136 4e-27
seq876 122 1e-22
seq784 102 9e-17
>seq397
Length=203225
Score = 136 bits (150), Expect = 4e-27
Identities = 141/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| |
Sbjct 148995 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 149054
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| |
Sbjct 149055 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 149113
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || ||||| | || ||||| || |||||||| || || ||
Sbjct 149114 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 149173
Query 46583 AA 46584
||
Sbjct 149174 AA 149175
>seq876
Length=62397
Score = 122 bits (134), Expect = 1e-22
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418
|||| | ||| || | | |||||||||||| || | || |||||| || || || |
Sbjct 14519 ATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTAT 14578
Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478
|||| || ||||| || |||| || ||||| ||||| ||||| |||||||||||||| |
Sbjct 14579 AGTCAGAAAGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGAT 14638
Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538
| | || | || ||||||||| |||||| ||| | | | | |||||| |
Sbjct 14639 CAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGG 14698
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || || || | |||||| ||||| || ||||| || || || || || |||||
Sbjct 14699 ACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753
Score = 111 bits (122), Expect = 2e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| || || ||||||||||| || || ||||| |||| || |||||||||||||||||
Sbjct 15019 TCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAG 15078
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||||||||| || | || ||||||||| |||||| ||| | |
Sbjct 15079 ATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTG 15138
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| ||| || || || | || ||||| || || ||||| || |||||
Sbjct 15139 TCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 15197
Score = 109 bits (120), Expect = 6e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || ||| | || || || | |||| || |||||||||||||| || ||
Sbjct 14755 CCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAG 14814
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || | || || ||||||||||||||||| || | |||||||||||| | ||
Sbjct 14815 AGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 14874
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542
| || |||||| ||| |||||| |||||| ||| | | | || || |||| ||
Sbjct 14875 ATGCCCTCCTTATCCTGGATCTTGCTCTTGA-CGTTGTCAATAGTATCTGAGCTC---TC 14930
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | |||||| || || || || || || || || || || |||||
Sbjct 14931 GACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981
>seq784
Length=190714
Score = 102 bits (112), Expect = 9e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| ||||| || || |||||||| | || ||||||||||||||||||||
Sbjct 31089 CTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 31148
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| |||||||||||| | || | | |||||||||
Sbjct 31149 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 31187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565230020340720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |