Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq397 136 4e-27 seq876 122 1e-22 seq784 102 9e-17 >seq397 Length=203225 Score = 136 bits (150), Expect = 4e-27 Identities = 141/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| | Sbjct 148995 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 149054 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| | Sbjct 149055 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 149113 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 149114 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 149173 Query 46583 AA 46584 || Sbjct 149174 AA 149175 >seq876 Length=62397 Score = 122 bits (134), Expect = 1e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || | | |||||||||||| || | || |||||| || || || | Sbjct 14519 ATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTAT 14578 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || ||||| || |||| || ||||| ||||| ||||| |||||||||||||| | Sbjct 14579 AGTCAGAAAGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGAT 14638 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || ||||||||| |||||| ||| | | | | |||||| | Sbjct 14639 CAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGG 14698 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | |||||| ||||| || ||||| || || || || || ||||| Sbjct 14699 ACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || || ||||||||||| || || ||||| |||| || ||||||||||||||||| Sbjct 15019 TCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAG 15078 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||||||||| || | || ||||||||| |||||| ||| | | Sbjct 15079 ATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTG 15138 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || || | || ||||| || || ||||| || ||||| Sbjct 15139 TCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 15197 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || | || ||| | || || || | |||| || |||||||||||||| || || Sbjct 14755 CCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAG 14814 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||||||||| || | |||||||||||| | || Sbjct 14815 AGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 14874 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | || |||||| ||| |||||| |||||| ||| | | | || || |||| || Sbjct 14875 ATGCCCTCCTTATCCTGGATCTTGCTCTTGA-CGTTGTCAATAGTATCTGAGCTC---TC 14930 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||| || || || || || || || || || || ||||| Sbjct 14931 GACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 >seq784 Length=190714 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || || |||||||| | || |||||||||||||||||||| Sbjct 31089 CTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 31148 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||||||||| | || | | ||||||||| Sbjct 31149 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 31187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565230020340720