Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq876 89.7 3e-13 >seq876 Length=62397 Score = 89.7 bits (98), Expect = 3e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| || |||||||||||||| | || | || || Sbjct 15288 ACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCCTCA 15347 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || || || | ||| ||||| || | || | |||||||||||| Sbjct 15348 AGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCCTGG 15407 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | || | |||| || |||||| || | ||| ||||| || Sbjct 15408 ATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACCTCAAGGGTGATGGTCTTG 15467 Query 34953 CCCGTGA 34959 || |||| Sbjct 15468 CCAGTGA 15474 Score = 86.0 bits (94), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| || ||||||||||||||||| ||||| | || | || Sbjct 14541 CAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTC 14600 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || |||||||| || || || || | || ||||| || | || | ||||||||||| Sbjct 14601 CTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTC 14660 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944 ||||| || || | ||||||| || || ||| || || | || | Sbjct 14661 TTGGATCTTGGACTTCAC----GTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGA 14716 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | |||||||| || || ||||| || || ||||||||| Sbjct 14717 TTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCATA 14754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628907624208