Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq876 89.7 3e-13
>seq876
Length=62397
Score = 89.7 bits (98), Expect = 3e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| || |||||||||||||| | || | || ||
Sbjct 15288 ACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCCTCA 15347
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | ||| ||||| || | || | ||||||||||||
Sbjct 15348 AGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCCTGG 15407
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| || ||| | || | |||| || |||||| || | ||| ||||| ||
Sbjct 15408 ATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACCTCAAGGGTGATGGTCTTG 15467
Query 34953 CCCGTGA 34959
|| ||||
Sbjct 15468 CCAGTGA 15474
Score = 86.0 bits (94), Expect = 4e-12
Identities = 150/218 (69%), Gaps = 8/218 (4%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||| ||| | ||| || ||||||||||||||||| ||||| | || | ||
Sbjct 14541 CAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTC 14600
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| |||||||| || || || || | || ||||| || | || | |||||||||||
Sbjct 14601 CTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTC 14660
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944
||||| || || | ||||||| || || ||| || || | || |
Sbjct 14661 TTGGATCTTGGACTTCAC----GTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGA 14716
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| |||||||| || || ||||| || || |||||||||
Sbjct 14717 TTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCATA 14754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324628907624208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |