Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq876 105 5e-18 >seq876 Length=62397 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || |||||||||| || || ||| ||| || ||||| || || ||||| Sbjct 14526 GCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 14585 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || |||| || | ||| || || || || |||| ||||| ||||| | || Sbjct 14586 AAGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGG 14645 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| ||||| || || | | | | || || | ||| || Sbjct 14646 GATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGAC 14705 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | ||| || |||||||| |||| || || || ||||||||||| Sbjct 14706 CTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||| ||||||||||| || ||| | || | || || | |||||| ||||| || Sbjct 14791 TCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAG 14850 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || ||||| || || | |||| ||||||||| || ||||| || || Sbjct 14851 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTG 14910 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || ||||| ||| || || | ||| || || ||||| || | || || || Sbjct 14911 TCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACG 14970 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 14971 AAAATCTGCAT 14981 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||||||||| ||||| || | || |||| || | |||||| ||||| || Sbjct 15019 TCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAG 15078 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || ||||| || || | |||| |||||||||||| ||||| || ||| Sbjct 15079 ATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTG 15138 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCA 48744 | | | || |||| ||| ||||| | ||||| || ||||| |||| Sbjct 15139 TCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTTCCGGTCA 15187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380932093785078