Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq876 129 4e-24 >seq876 Length=62397 Score = 129 bits (142), Expect = 4e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| ||||||||| |||||| | ||| ||||| | ||||| Sbjct 14760 ACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGT 14819 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| ||||| || || || ||||| || || || ||||||||||| || Sbjct 14820 ACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCC 14879 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||| || || ||||| ||||| ||||||||||| | | | | | ||| | Sbjct 14880 CTCCTTATCCTGGATCTTGCTCTTGACGTTGTCAATAGTATCTGAGCTCTCGA-CTTCGA 14938 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || ||||| || ||||| |||||||| || Sbjct 14939 GCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTG 14978 Score = 98.7 bits (108), Expect = 6e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| ||||| || ||||| |||||| || ||| || |||| || || Sbjct 14988 ACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGAAAGGGT 15047 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||||| ||||| || || || ||||| || || || || |||||||| || Sbjct 15048 GCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATGCC 15107 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||| ||||| || ||| || || || || | | | | || | Sbjct 15108 CTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGA-CCTCGA 15166 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 ||||||| || || ||||| || |||||||||| Sbjct 15167 GGGTAATGGTCTTTCCGGTCAGGGTCTTAACGA 15199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268128326705528