Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq876 129 4e-24
>seq876
Length=62397
Score = 129 bits (142), Expect = 4e-24
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| ||||| ||||||||| |||||| | ||| ||||| | |||||
Sbjct 14760 ACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGT 14819
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||||||||| ||||| || || || ||||| || || || ||||||||||| ||
Sbjct 14820 ACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCC 14879
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
||||| || || ||||| ||||| ||||||||||| | | | | | ||| |
Sbjct 14880 CTCCTTATCCTGGATCTTGCTCTTGACGTTGTCAATAGTATCTGAGCTCTCGA-CTTCGA 14938
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || ||||| || ||||| |||||||| ||
Sbjct 14939 GCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTG 14978
Score = 98.7 bits (108), Expect = 6e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| ||||| || ||||| |||||| || ||| || |||| || ||
Sbjct 14988 ACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGAAAGGGT 15047
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||||| ||||| || || || ||||| || || || || |||||||| ||
Sbjct 15048 GCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATGCC 15107
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||||||||| ||||| || ||| || || || || | | | | || |
Sbjct 15108 CTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGA-CCTCGA 15166
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762
||||||| || || ||||| || ||||||||||
Sbjct 15167 GGGTAATGGTCTTTCCGGTCAGGGTCTTAACGA 15199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268128326705528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |