Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq600 125 9e-23 seq510 116 5e-20 seq456 114 2e-19 seq411 113 6e-19 seq592 109 7e-18 >seq600 Length=572387 Score = 125 bits (138), Expect = 9e-23 Identities = 284/430 (66%), Gaps = 8/430 (2%) Strand=Plus/Minus Query 1628167 ACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGT 1628225 |||||||||||||||||||||| | || | ||||||||||||| |||||| | | Sbjct 324656 ACGATCTCGGTGCACAGGTTGGAGCTGCGAA-TGGTACCCAGGTTCTTCTGGTTACTCTT 324598 Query 1628226 CAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGAC 1628285 | |||| || ||||||| ||||||| |||| || ||||| |||| ||| ||| Sbjct 324597 CTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAG 324538 Query 1628286 GATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNNNNNNN 1628342 ||||| |||||| || | || | || ||| ||| | ||||||| Sbjct 324537 AATGGCGTACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGACCACGGCCCTCTTGCTC 324481 Query 1628343 NNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTC 1628402 || || | | || ||| || ||| ||||| || || Sbjct 324480 GTACTTGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGTCCGGGGGCTTC 324421 Query 1628403 GGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACA 1628462 | || || ||||| | |||||| || || | | |||| ||| ||||| || Sbjct 324420 GTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGG 324361 Query 1628463 CGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTT 1628522 ||||||| ||||| || ||||| || || || ||||||||| ||||||||||| Sbjct 324360 GGTCCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCG 324301 Query 1628523 GAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 || ||||| | |||| | |||||||||||||||||||||||| ||||||||| || Sbjct 324300 CAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACC 324241 Query 1628583 CTTGCGCTTG 1628592 ||||||| Sbjct 324240 AGGGCGCTTG 324231 Score = 109 bits (120), Expect = 7e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| || |||| |||||| || ||||||||||| |||| |||||||| Sbjct 324222 CTGGTCAACGTAGCGTGCGGTGTTGTTAAACACACGGAGCATGGGAACGATACCGTTGGA 324163 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||| | |||| ||||| | ||| || | || Sbjct 324162 GGAACCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACGTTCAGACC 324103 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| || | ||||||||| | || || ||||| ||||| ||||| ||||| Sbjct 324102 GATACCGCCAGCAGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATACCCTC 324043 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| || ||| ||| || | ||||| || | || || || | || | Sbjct 324042 AATGCTGTCCGCGCTCACGTCGACCAAGAAGCAAGATGCAAGCTGGGGTTGGGGAGTAGC 323983 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||| ||||| || ||||| Sbjct 323982 GGCATTGAACAGAGTGGG 323965 >seq510 Length=829487 Score = 116 bits (128), Expect = 5e-20 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 268754 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 268695 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 268694 GACTCCATGAAGTCGAAGGGGTTGGCAGCGTTGTAGTACTTCTTGTTACCGAGGGCCACC 268635 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||||||| || || || ||||| ||||||| |||||| || | ||||||||| | Sbjct 268634 AGCAGGCGATCAGCAACGAACTCAATGTACTCGCACATCAGCTTCGAGTTCATGCCAAGC 268575 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || | || || | || ||| ||||| | |||||| ||||||||||||| || Sbjct 268574 AGACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAATA 268515 Query 868931 AT 868932 || Sbjct 268514 AT 268513 Score = 109 bits (120), Expect = 7e-18 Identities = 179/255 (70%), Gaps = 11/255 (4%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 268103 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGATCTGG 268044 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| ||||| |||||| |||||||| Sbjct 268043 ACCTCTGAACTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCGGAAGCGGCGAAG 267984 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || ||||||||||| ||| |||| ||||| |||||| | | ||| ||||| Sbjct 267983 AAGGCCAGGACGTGAGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGT-- 267926 Query 869810 ACGGTGTCGGCGCT----GAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTT 869865 ||| | || ||| || | |||||| |||||||||| ||||| ||||| || Sbjct 267925 --CGTGAAGATCCTTAGAGAGATCGATCTCCTCAGCGGTCCAGAAGGAGGCTTCGGCTTT 267868 Query 869866 TTTGTACATCTCCCA 869880 |||||||| | ||| Sbjct 267867 CTTGTACATTTGCCA 267853 >seq456 Length=155449 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||| ||||| || |||||| | || || || | || |||||| | || |||||| Sbjct 13040 GCTGCCAATTACCTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCCAAC 13099 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||||||||| |||||| || Sbjct 13100 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 13150 >seq411 Length=636761 Score = 113 bits (124), Expect = 6e-19 Identities = 246/365 (67%), Gaps = 9/365 (2%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | |||||| | || | || | | |||||||||||| Sbjct 23843 TGGGGGTGCGAGGCGGCGCCGATGGCGTCCACGGCGACGGTCAGGTTACCGTCGGTGCCG 23902 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| || | ||||||||| | |||| |||| Sbjct 23903 TTCTTGTAGCCGATGGGGAAGGACAGGCCCGAGGCGAGCTCGCGGTGAAGCTGGGACTCG 23962 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA---AGGGGCCACC 1726861 || ||||| ||||| | |||||| | | ||| ||||||| ||| ||||| Sbjct 23963 GTGGTGCGGGCGCCGATCGCGCCCAGTGAGATCAGATCTGCCAGATACTGAGGGG---AG 24019 Query 1726862 AGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAAC 1726921 | || ||| | ||| ||| | ||| | || | | | | || ||| || Sbjct 24020 ATAGTGTCGAGCATCTCCGAGGCGATGGGGAG-TC--CCGTGCTGGTCAGGTCGGTGTAC 24076 Query 1726922 AGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCG 1726981 || || ||| | ||| || | | | | | | | | |||||| |||||||||| Sbjct 24077 AGCTTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGTCG 24136 Query 1726982 CTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACC 1727041 || ||| |||||||| ||||| || ||||| ||||| || | ||||||||||||| | Sbjct 24137 TTGATCAGTCCCTTCCAGCCGACTGTTGTGCGGGGCTTCTCCAGGTAGGCGCGCATGATC 24196 Query 1727042 ACGCA 1727046 ||||| Sbjct 24197 ACGCA 24201 >seq592 Length=562986 Score = 109 bits (120), Expect = 7e-18 Identities = 119/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || |||||| ||||||||||| | || || |||||| Sbjct 267897 GACAGCATCGGAGGAACCGTAACATGCGTGATCCGCAACGTGCCAGTTGGACTGGGCGAG 267838 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || ||| ||||| |||||| ||||| ||||| || ||| Sbjct 267837 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 267778 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| ||||| || ||| ||| || |||| |||| Sbjct 267777 AAGGGCTTCGAAATCGGCTCCGGTTTCGGCGGCTGCG 267741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107041871285962