Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq876 104 2e-17
>seq876
Length=62397
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616
|| || || | || ||||| ||||| || || ||||| || || ||||||||||| ||
Sbjct 14524 TGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCA 14583
Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676
| || || || || || || ||||||||||| | ||||| | |||||||| ||
Sbjct 14584 GAAAGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGA 14643
Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736
|| || ||||| |||||||| | || || || | || | ||||| || ||
Sbjct 14644 GGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCG 14703
Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || ||||| || || | ||| || || || ||||||||
Sbjct 14704 ACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || |||| || || ||||| ||||| || || ||||| |||| || ||||||
Sbjct 15282 CGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCG 15341
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || ||||||||||| | ||||||| |||||||| || || || ||||| |||
Sbjct 15342 TCCTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTG 15401
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || || | || | ||| ||| || || ||||| || ||
Sbjct 15402 TCCTGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACCTCAAGGGTGATG 15461
Query 29752 GTTTTGCCAGT 29762
|| ||||||||
Sbjct 15462 GTCTTGCCAGT 15472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385213631897226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |