Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq876 118 2e-21 >seq876 Length=62397 Score = 118 bits (130), Expect = 2e-21 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || ||||||||||| || ||||| ||||| | Sbjct 14753 TACCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCG 14812 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||| || || || || || ||||| || | || || || |||| Sbjct 14813 AGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAG 14872 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGT-TC 82759 | || || |||||||| || ||| ||||| || || || ||||| ||||| | || | || Sbjct 14873 GAATGCCCTCCTTATCCTGGATC-TTGCTCTTGACGTTGTCAATAGTATC-TGAGCTCTC 14930 Query 82760 TACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | || || ||||| || || | ||||| || || |||||||| Sbjct 14931 GACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 Score = 96.9 bits (106), Expect = 7e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || ||||||||||| ||||| || ||||| || | | ||| Sbjct 14995 CGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCG 15054 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || || || ||||| || | || || || ||||| || || ||||| Sbjct 15055 TCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTG 15114 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| ||||| | || ||||| || || || || | || || || | || || Sbjct 15115 TCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATG 15174 Query 82776 GTCTTGCCTGTCAACGTCTTTAC 82798 ||||| || |||| ||||| || Sbjct 15175 GTCTTTCCGGTCAGGGTCTTAAC 15197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981812280522054