Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq876 102 2e-16 seq600 95.1 3e-14 >seq876 Length=62397 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || ||||| | ||||| || || || || Sbjct 14978 CAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCAGAT 14919 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || ||| || ||| || Sbjct 14918 ACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAG 14859 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| |||||| | |||||||| | ||| | | |||||||| || Sbjct 14858 CGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAATATC 14799 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||||| ||||| ||||||||||| Sbjct 14798 CAAAAAGAATCTACACTTCACCTTGT 14773 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| ||||| ||||| |||| ||| || || | | ||| | |||||||| Sbjct 14773 ACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCA 14832 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| |||||||||||||| || || || Sbjct 14833 AGCTGCTTGCCGGCGAAGATAAGGCGCTGCTG 14864 >seq600 Length=572387 Score = 95.1 bits (104), Expect = 3e-14 Identities = 169/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||||| |||||||| ||||| ||| | |||||| | | |||| || | Sbjct 324587 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 324528 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | ||| | | | | || |||| ||||| | | ||| Sbjct 324527 CAGAGCTTCTGAGCCTTGATGGTCTTGCGACCACGGCCCTCTTGCTCGTACTTGGCGTAG 324468 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | || || | || | || ||||| ||||| || || || ||| Sbjct 324467 AGAGCATCGAACTCATCACCATAGACATCAGCCAGTCCGGGGGCTTCGTTAGGGCAGAAG 324408 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | || | || ||| || | |||||||||||| |||| ||||| | ||| Sbjct 324407 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCG 324348 Query 173347 TAGAACA 173353 ||||||| Sbjct 324347 TAGAACA 324341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181802841494306