Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq876 102 2e-16
seq600 95.1 3e-14
>seq876
Length=62397
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || ||||| || ||||| | ||||| || || || ||
Sbjct 14978 CAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCAGAT 14919
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || || || ||| || ||| ||
Sbjct 14918 ACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAG 14859
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||||||||| |||||| | |||||||| | ||| | | |||||||| ||
Sbjct 14858 CGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAATATC 14799
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|| ||||| ||||| |||||||||||
Sbjct 14798 CAAAAAGAATCTACACTTCACCTTGT 14773
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
||||||||||| ||||| ||||| |||| ||| || || | | ||| | ||||||||
Sbjct 14773 ACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCA 14832
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| |||||||||||||| || || ||
Sbjct 14833 AGCTGCTTGCCGGCGAAGATAAGGCGCTGCTG 14864
>seq600
Length=572387
Score = 95.1 bits (104), Expect = 3e-14
Identities = 169/247 (68%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| |||||||||| |||||||| ||||| ||| | |||||| | | |||| || |
Sbjct 324587 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 324528
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
|| || | || || || | ||| | | | | || |||| ||||| | | |||
Sbjct 324527 CAGAGCTTCTGAGCCTTGATGGTCTTGCGACCACGGCCCTCTTGCTCGTACTTGGCGTAG 324468
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
|| | ||||| || | || || | || | || ||||| ||||| || || || |||
Sbjct 324467 AGAGCATCGAACTCATCACCATAGACATCAGCCAGTCCGGGGGCTTCGTTAGGGCAGAAG 324408
Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346
|| |||| | || | || ||| || | |||||||||||| |||| ||||| | |||
Sbjct 324407 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCG 324348
Query 173347 TAGAACA 173353
|||||||
Sbjct 324347 TAGAACA 324341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181802841494306
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |