Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq510 152 7e-31 seq600 122 1e-21 seq411 89.7 7e-12 >seq510 Length=829487 Score = 152 bits (168), Expect = 7e-31 Identities = 219/303 (72%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| | |||| |||| |||||||| |||||||| |||||| |||| | Sbjct 267849 GATCTGGCAAATGTACAAGAAAG-CCGAAGCCTCCTTCTGGACCGCTGAGGAGATCGATC 267907 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 267908 TCTCTAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 267963 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| ||||| || |||||| ||| || ||||| ||||||||| | Sbjct 267964 ATCTCTCACGTCCTGGCCTTCTT-CGCCGCTTCCGACGGTATCGTCAACGAGAACCTTGT 268022 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 268023 CGAGCGTTTCAGTTCAGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 268082 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || || ||||| || || ||||||||||| | ||||| Sbjct 268083 CATGATGGAGAACATCCACTCCGAGACATACTCCCTGCTCATCGACACCTATATTAAGGA 268142 Query 1456068 CCC 1456070 || Sbjct 268143 ACC 268145 Score = 105 bits (116), Expect = 1e-16 Identities = 182/259 (70%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 || || ||||||||||||| |||||| | ||||| | | || | || || | Sbjct 268513 ATTATTGTCGAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCTGCGGT 268572 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| | | ||| |||||| |||||||||| || || || || |||| Sbjct 268573 CTGCTTGGCATGAACTCGAA-GCTGATGTGCGAGTACATTGAGTTC-GTTGCTGATCGCC 268630 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| ||||| | ||||| ||||| | |||||||| ||| | ||| Sbjct 268631 TGCTGGTGGCCCTCGGTAACA-AGAAGTACTACAACGCTGCCAACCCCTTCGACTTCATG 268689 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 268690 GAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 268749 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 268750 AAGGCTGGTGTCATGGCCA 268768 >seq600 Length=572387 Score = 122 bits (134), Expect = 1e-21 Identities = 202/289 (70%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| ||| ||||| ||| || | ||||| || || ||||||| || || | Sbjct 323935 ATGTCCCAGAAGTACTTCAC-TCACGCCTCCCCCACTCTGTTCAATGCCGCTACTCCCCA 323993 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 || ||| | | || ||||| || | ||| ||| || || || ||||| ||||| Sbjct 323994 ACCCCAGCTTGCATCTTGCTTCTTGGTCGACGTGAGCGCGGACAGCATTGAGGGTATCTA 324053 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 |||||| |||||| || || | ||||||||| | || ||||| |||||| | || Sbjct 324054 TGACACTCTCAAGACCTGTGCCATGATCTCCAAGACTGCTGGCGGTATCGGTCTGAACGT 324113 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | ||||| | || | ||| | | || |||||||| |||||||| | Sbjct 324114 CCACCGCATTCGCGCTACCGGTTCTTACATTGGTGGAACCAACGGTTCCTCCAACGGTAT 324173 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || |||||||| || || |||||| |||| || |||||||| |||||| Sbjct 324174 CGTTCCCATGCTCCGTGTGTTTAACAACACCGCACGCTACGTTGACCAG 324222 Score = 111 bits (122), Expect = 2e-18 Identities = 289/437 (66%), Gaps = 16/437 (4%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || ||||||||| ||||||||| |||||||||||||| || || | | Sbjct 324231 CAAGCGCCCTGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 324290 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| |||| |||| || || || | | || || Sbjct 324291 CCTCGATCTGCGGAAGAACCACGGTAAGGA----GGAGGTTCGTGCCCGTG--ACCTGTT 324344 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| ||||||| ||| || || ||| ||| | | | || | | |||||| | Sbjct 324345 CTACGCTTTGTGGACCCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 324404 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| ||||| ||| || ||||| ||| || |||||| | | || || || Sbjct 324405 ACTCTTCTGCCCTAACGAAGCCCCCGGACTGGCTGATGTCTATGGTGATGAGTTCGATGC 324464 Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGCG-GACCGTCGTGCCCGCACGACA 262092 ||||| | | ||| |||| || | | || || | Sbjct 324465 TCTCTACGCCAAGTACGAGCAAGAGGGCCGTGGTCGCAAGACCATCAAGGCT-CA-GA-A 324521 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 | |||||| |||||| ||| ||| || | ||||| || | |||| |||| ||||||| Sbjct 324522 GCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACAA 324581 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210 ||| || |||| || || |||||| |||||||||| |||| || ||| ||||| Sbjct 324582 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACCATTCG-CAGCT-CCAAC 324639 Query 262211 CTGTGCACCGAGATCGT 262227 ||||||||||||||||| Sbjct 324640 CTGTGCACCGAGATCGT 324656 >seq411 Length=636761 Score = 89.7 bits (98), Expect = 7e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 165744 TATTTGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTG 165803 ||| ||||||| ||| || | |||||| |||| || |||||||||||| |||| | Sbjct 24009 TATCTGGCAGATCTGATCTCACTGGGCGCGATCGGCGCCCGCACCACCGAGTCCCAGCTT 23950 Query 165804 CACCGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGG 165862 ||||||||| | || |||| ||| | | ||||| |||| ||| ||| |||||||||| Sbjct 23949 CACCGCGAGCTCGCCTCGGGCCTGTCCTTCCCCATCGGCTACAAGAACGGCACCGACGG 23891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177696808120132