Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq600 242 5e-59 seq510 89.7 6e-13 seq1142 84.2 3e-11 >seq600 Length=572387 Score = 242 bits (268), Expect = 5e-59 Identities = 576/865 (67%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||||| || || | ||||| |||||| |||||| | ||||||| | Sbjct 324713 GGGAGGGCGAGGGAAGCAAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCAACG 324654 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| || ||| || |||| ||||| ||||||||||||||| Sbjct 324653 ATCTCGGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTACTCTTCTTG 324594 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| |||| | || ||||| ||||| | | |||||| Sbjct 324593 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATG 324534 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || | |||| ||| | || ||||| |||||| Sbjct 324533 GCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGACCACGGCCCTCTTGCTCGTA 324478 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| | |||||| || || ||||| ||||| | || | || || || || | || Sbjct 324477 CTTGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGTCCGGGGGCTTCGTT 324418 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| ||||||||||| || || || | Sbjct 324417 AGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGT 324358 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||||| | | || || || | ||| |||| || | ||| ||||| || | Sbjct 324357 CCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAG 324298 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || |||||||| | || ||| |||||||| ||||| || |||| || | || Sbjct 324297 ATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCAGG 324238 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| | ||| | || | || ||||| || ||| |||||| || || ||||| Sbjct 324237 GCGCTTGTTA---CCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAACACACGGAGCAT 324181 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 |||| ||||| | || ||| || || || | ||| ||| | || | | Sbjct 324180 GGGAACGATACCGTTGGAGGAACCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 324121 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 |||| || || || ||||| ||||| ||| ||||| ||||| | | || Sbjct 324120 GCGGTGGACGTTCAGACCGATACCGCCAGCAGTCTTGGAGATCATGGCACAGGTCTTGAG 324061 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| |||||||||| | || |||| | | | ||| | ||||||| | | Sbjct 324060 AGTGTCATAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGAAGCAAGATGCAAG 324001 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 111998 ||| ||| || ||| | |||||||| || || || | |||||| |||| ||| | | Sbjct 324000 CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAA-GTACTTCT 323942 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||||| || ||||||||| | | | |||||||| || ||||| || |||| | Sbjct 323941 GGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAG 323882 Query 112059 CGACCCGCATGAACATGTACTGTGG 112083 | || ||||||| || || ||| || Sbjct 323881 CAACACGCATGAGCAAGTGCTGGGG 323857 >seq510 Length=829487 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || ||||| ||||| ||||| || || Sbjct 268446 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 268387 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||| ||| | || | | ||||| || ||||||||||||||||| ||| Sbjct 268386 ACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCAGAGAAGAAGATACCCTCGACAGC 268327 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| || || ||||||| Sbjct 268326 GGCGAATGCAACCAGACGCGAAGCGAAGG 268298 >seq1142 Length=621234 Score = 84.2 bits (92), Expect = 3e-11 Identities = 210/312 (67%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAG 11688 ||||| || ||||||||||| | || || || || | ||| ||||| | | ||||| Sbjct 457756 GCATCGATTTCATCAATGAAAATGATGCAGGGGGTGTTCTTC-CGGGCATTGGCGAAGAG 457698 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-C 11747 |||||| || | || ||| ||||| |||||||| || || || | | || | | Sbjct 457697 ATCGCGGACACGAGAGGGACCGACACCGACAAACATTTCGACGAACTCGGAACCACTGAC 457638 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 |||| | ||| || || |||||||| || | || || || | ||||| || | Sbjct 457637 ACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTTGCCTTAGCAAGCAATGTCTTACCAG 457579 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATA 11865 |||| || ||| | ||||| ||| || ||||| ||||| ||||| |||| | | Sbjct 457578 TACCGGGGGGACCTGAGAGAATGGCACCACGGGGAATCTTTGCACCGAGCTTCTCGA--A 457521 Query 11866 TCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAAT 11925 | ||||||||||| ||| || |||| || | |||| | ||||| |||| || Sbjct 457520 CCGCTCGGGTTGCTGGAGGAAGCTAACAAATTCCATGATTTCAACCTTGGCTTCGTCCAT 457461 Query 11926 CCCCTCAACATC 11937 ||| |||| || Sbjct 457460 ACCCGCAACGTC 457449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628022689425600