Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq876 136 2e-27 >seq876 Length=62397 Score = 136 bits (150), Expect = 2e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||||||||||| ||||||||| |||||| ||||||||||| || || Sbjct 14526 GCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 14585 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || |||| ||||| ||||| || || || || || ||||| || || || || Sbjct 14586 AAGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGG 14645 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| || || ||||| | ||| | Sbjct 14646 GATGCCCTCCTTGTCTTGGATC-TTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGA 14704 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || ||||| ||||| | || || || ||||||||||| Sbjct 14705 CCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753 Score = 91.5 bits (100), Expect = 9e-14 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || ||||| || || ||||| || || || || | |||||||| || || ||||| || Sbjct 14791 TCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAG 14850 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||||| ||||| || || | |||||||| || |||||| | || ||| | Sbjct 14851 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGC-TCTTGACGTT 14909 Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| || ||| |||||| ||||| | || || || || ||||||| || || || Sbjct 14910 GTCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGAC 14969 Query 34695 AAAAATCTGCAT 34706 ||||||||||| Sbjct 14970 GAAAATCTGCAT 14981 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || || | |||| ||||||||| ||| || || || ||||| || ||| Sbjct 15270 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAA 15329 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| ||||| || || || || || ||||| || || || || Sbjct 15330 AGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 15389 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 15390 ATCCCCTCCTTGTCCTGGATCTT 15412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725050780338