Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq876 136 2e-27
>seq876
Length=62397
Score = 136 bits (150), Expect = 2e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||||||||||| ||||||||| |||||| ||||||||||| || ||
Sbjct 14526 GCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 14585
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| ||||| ||||| || || || || || ||||| || || || ||
Sbjct 14586 AAGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGG 14645
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| |||| || | || ||| || || ||||| | ||| |
Sbjct 14646 GATGCCCTCCTTGTCTTGGATC-TTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGA 14704
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || ||||| ||||| | || || || |||||||||||
Sbjct 14705 CCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753
Score = 91.5 bits (100), Expect = 9e-14
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| ||||| || || ||||| || || || || | |||||||| || || ||||| ||
Sbjct 14791 TCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAG 14850
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| | ||||| ||||| || || | |||||||| || |||||| | || ||| |
Sbjct 14851 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGC-TCTTGACGTT 14909
Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
||| || ||| |||||| ||||| | || || || || ||||||| || || ||
Sbjct 14910 GTCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGAC 14969
Query 34695 AAAAATCTGCAT 34706
|||||||||||
Sbjct 14970 GAAAATCTGCAT 14981
Score = 82.4 bits (90), Expect = 5e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || || | |||| ||||||||| ||| || || || ||||| || |||
Sbjct 15270 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAA 15329
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| ||||| ||||| || || || || || ||||| || || || ||
Sbjct 15330 AGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 15389
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 15390 ATCCCCTCCTTGTCCTGGATCTT 15412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314725050780338
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |