Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq876 197 3e-45 seq397 127 5e-24 seq784 120 7e-22 seq600 116 9e-21 >seq876 Length=62397 Score = 197 bits (218), Expect = 3e-45 Identities = 171/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || || ||||||||||| || ||||||| || || | |||||| Sbjct 14770 AGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCT 14829 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||||||||| || ||||||||||||| || ||||| ||| Sbjct 14830 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 14889 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || || || ||||| || || ||||| ||||| ||| Sbjct 14890 TGGATCTTGCTCTTGACGTTGTCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTC 14949 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || || | |||||| Sbjct 14950 TTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || || ||||| || || || || || | |||||| | || ||| Sbjct 14998 AGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTCT 15057 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||||||||| || ||||| ||||||| || |||||||| Sbjct 15058 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCT 15117 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| || || |||||||| || || ||| Sbjct 15118 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTC 15177 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 15178 TTTCCGGTCAGGGTCTTAAC 15197 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| ||||||||||| || || |||||||| || | ||| || | || || || Sbjct 14545 ACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCA 14604 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 ||||| ||||| |||||||| | ||| || || |||||||| | || |||||||| ||| Sbjct 14605 AGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGG 14664 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| |||||||| ||||||||||| ||| || ||||| || ||||| || ||| Sbjct 14665 ATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGTTTTT 14724 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || | |||||| Sbjct 14725 CCGGTCAGGGTCTTGACGAAAATCTGCAT 14753 Score = 149 bits (164), Expect = 1e-30 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| ||||| ||||| |||| ||| || | || || Sbjct 15285 AGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCC 15344 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| ||||| |||||||| | || || || |||||||| | || ||||||||| Sbjct 15345 TCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCC 15404 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || ||| | |||||||| || ||||| ||| Sbjct 15405 TGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACCTCAAGGGTGATGGTC 15464 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 15465 TTGCCAGTGA 15474 >seq397 Length=203225 Score = 127 bits (140), Expect = 5e-24 Identities = 138/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || ||||||||||| |||||||| Sbjct 148997 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 149056 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 149057 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 149116 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 149117 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 149173 Query 211104 AA 211105 || Sbjct 149174 AA 149175 >seq784 Length=190714 Score = 120 bits (132), Expect = 7e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| ||||||||||| ||||| | ||| || | ||||| Sbjct 31069 AGGACGAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 31128 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || |||||||| |||| || |||||||| Sbjct 31129 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 31187 >seq600 Length=572387 Score = 116 bits (128), Expect = 9e-21 Identities = 192/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| ||||| |||||||| | || Sbjct 324615 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 324559 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| |||||| |||||||| | ||| |||| ||| || || ||||| Sbjct 324558 AGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 324499 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | || || | ||||||||| |||||| | ||||| || ||||||||||| Sbjct 324498 ACCACGGCCCTCTTGCTCGTACTTGGCGTAGAGAGCATCGAACTCATCACCATAGACATC 324439 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || ||||| || || || ||||||||||| |||| | ||||| ||| || || Sbjct 324438 AGCCAGTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCG 324379 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | |||||| | || ||||| Sbjct 324378 CTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAA 324343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159134385960890