Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq876 149 1e-30
seq376 98.7 2e-15
seq397 89.7 1e-12
>seq876
Length=62397
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || || ||||||||||||| ||||||||| | | ||| | ||||||
Sbjct 14770 AGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCT 14829
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||||||||| || || ||||| || ||||| || ||||| ||
Sbjct 14830 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 14889
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || || || || |||||| | || || || | |||||| |||
Sbjct 14890 TGGATCTTGCTCTTGACGTTGTCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTC 14949
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | || || | ||| | |||||
Sbjct 14950 TTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981
Score = 149 bits (164), Expect = 1e-30
Identities = 147/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| || |||||||| || | |||||| || | | || | || |||
Sbjct 14998 AGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTCT 15057
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||||||||| || || |||||||| ||||| || |||||||||
Sbjct 15058 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCT 15117
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| || | || || || | || || |||
Sbjct 15118 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTC 15177
Query 225682 TTGCCCGTCA 225691
|| || ||||
Sbjct 15178 TTTCCGGTCA 15187
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || |||||||||||||| || || || | || || || | | |||
Sbjct 14532 ACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGT 14591
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || ||||| || ||||||||||| | || || || || || || || ||
Sbjct 14592 ACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCC 14651
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||||||||| |||||| ||||||||||| |||| || || || |
Sbjct 14652 CTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCAAG 14711
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| || || || |||| || || | ||| | |||||
Sbjct 14712 CGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753
Score = 105 bits (116), Expect = 2e-17
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||||||||| ||||| |||| ||| || || | | || | || ||
Sbjct 15285 AGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCC 15344
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || ||||||||||| | ||| || || || || || || || ||||||||
Sbjct 15345 TCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCC 15404
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| || || || || || || | ||||| |||
Sbjct 15405 TGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAACCTCAAGGGTGATGGTC 15464
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 15465 TTGCCAGT 15472
>seq376
Length=2626
Score = 98.7 bits (108), Expect = 2e-15
Identities = 200/293 (68%), Gaps = 7/293 (2%)
Strand=Plus/Plus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500
|| ||||||||||| |||| ||||||||| | | || || ||||| | |
Sbjct 270 ACTTTATATTTAATGTTTGCATTATTTTCTGGTTTAGTTGGAACAGCGTTTTCAGTTTTA 329
Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTT 7558
|| || ||||| ||| | | ||| ||| |||| |||| | || ||| || | |
Sbjct 330 ATTAGATTAGAGTTATCAGGTCCAGGTGTTCAATATATATCAGAC--AAT---CAGTTAT 384
Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618
| || ||| || || |||||||| | | ||||||||||| | |||||||| |
Sbjct 385 ATAATAGTATAATAACAGCGCATGCTATCTTGATGATTTTCTTCATGGTTATGCCTGCAT 444
Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678
| || || ||||| || |||| || | || ||| | |||| | ||| |||||||| |
Sbjct 445 TAATTGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTTGGGGGTCCAGATATGGCAT 504
Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731
|||| || | || |||||||||||||||||| || ||| |||||| ||
Sbjct 505 TTCCTAGATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 557
Score = 84.2 bits (92), Expect = 5e-11
Identities = 82/104 (79%), Gaps = 4/104 (4%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729
||||||||| ||||| ||||||||||||||||| ||||| ||||| || || || ||
Sbjct 950 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGGTCACCACCACCA 893
Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| | ||||| || |||||||| |||||||||||||| ||
Sbjct 892 GCTACTTCAAAGAATGATGTATTAAAGTTTCTATCAGTTAATAC 849
>seq397
Length=203225
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || || | ||||| || |||||||| || ||||||||
Sbjct 148997 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 149056
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || ||||| || |||||||| ||| || |||
Sbjct 149057 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 149116
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| | || || || | || || ||||| ||||||| || || | |||
Sbjct 149117 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 149175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192513078743084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |