Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1017 86.0 5e-12 >seq1017 Length=81064 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 48495 TGACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGA 48554 ||||| | |||| |||||||||| | || | ||| ||| | ||| |||| ||||| Sbjct 67862 TGACGACCTGAAGTTCGTCAAGGTTCGCATGCGTACCACCAAGATCCCCCAGATTGGTGA 67921 Query 48555 CAAGTTTGCGTC-CTTCACGGCGCAAAAGGGGACATGTGGAGC-CGTCCTGACCCAGGAG 48612 ||||||||| || | |||||| ||||| ||| | | | | | | || ||||| Sbjct 67922 CAAGTTTGCATCTCGTCACGGTCAGAAAGGTACCATTGGTATCACCTACCGA--CAGGAA 67979 Query 48613 GACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTT 48672 |||||||| || ||| || || || ||||| || || || ||||| |||||| || Sbjct 67980 GACATGCCTTTTACTCGGGAAGGTGTTGTCCCCGATCTGATTATTAACCCTCACGCCATT 68039 Query 48673 CCCTCCAGGATGACC 48687 |||||| | |||||| Sbjct 68040 CCCTCCCGTATGACC 68054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369501859004366