Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq876 132 1e-25 seq784 84.2 5e-11 >seq876 Length=62397 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| ||||| ||||| ||||||||||| |||||||| | | ||| | ||||| Sbjct 14769 GAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATC 14828 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || |||||||||||||| | ||||||||| | | || || ||||| || Sbjct 14829 TTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATC 14888 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | ||||| ||||| ||||| || || || || Sbjct 14889 CTGGATCTTGCTCTTGACGTTGTCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGT 14948 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| | |||||| Sbjct 14949 CTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || || ||||| || || ||||| || | | || | || || Sbjct 14997 GAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTC 15056 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || |||||||||||||| | ||||||||| | | || || ||||| || Sbjct 15057 TTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 15116 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||| | || | | |||| || ||| || || || ||||| || Sbjct 15117 TTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGT 15176 Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094 || || || || ||||| |||| Sbjct 15177 CTTTCCGGTCAGGGTCTTAACGA 15199 >seq784 Length=190714 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || ||||| || ||||| ||||||||||||||||| | | ||| | ||||| Sbjct 31068 GAGGACGAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 31127 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||| | | || || ||||| || Sbjct 31128 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 31187 Query 152012 T 152012 | Sbjct 31188 T 31188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153803266971806