Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq876 161 2e-34 seq397 138 2e-27 seq784 123 5e-23 seq510 91.5 3e-13 >seq876 Length=62397 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || | ||||| || | ||| || || || ||||| ||||||| | Sbjct 14527 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAA 14586 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || ||||| || || |||||||| || || || ||| || Sbjct 14587 AGAGTACGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGG 14646 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| | || ||| ||||||| ||||| || | ||||| Sbjct 14647 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACC 14706 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || |||| ||||| ||||| |||||||| Sbjct 14707 TCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 14753 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | || |||||| || || |||||||||| Sbjct 14982 ACCACCACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAGTCAGA 15041 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| || || || || || ||||| ||||| | || || ||||| || Sbjct 15042 AAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGG 15101 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| | || || | ||||| ||||| || | ||||| Sbjct 15102 AATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGAC 15161 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| || || ||||| || |||| |||||||||| Sbjct 15162 CTCGAGGGTAATGGTCTTTCCGGTCAGGGTCTTAACGA 15199 Score = 152 bits (168), Expect = 1e-31 Identities = 175/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || |||||||||||| ||||| || | Sbjct 14754 ACCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGA 14813 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || |||||||| || || || || ||||| ||||| | || || |||||| || Sbjct 14814 GAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGG 14873 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 ||| |||||||| || |||||| ||||| || ||| | || ||||| || | |||| ||| Sbjct 14874 AATGCCCTCCTTATCCTGGATC-TTGCTCTTGACGTTGTCAATAGTATCTG-AGCTCTCG 14931 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 14932 ACTTCGAGCGTGATTGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 Score = 138 bits (152), Expect = 2e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| |||||||| ||||| || | ||| ||||| ||||| || ||||| | Sbjct 15269 ACCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGA 15328 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||| || ||||| || ||||| || || |||||||| || || || ||| || Sbjct 15329 AAGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGATCAGGAGG 15388 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | |||||| | |||||||| || | || || Sbjct 15389 GATCCCCTCCTTGTCCTGGATCTTCGACTTTACGTTGTCGATAGTATCACTGGACTCAAC 15448 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 15449 CTCAAGGGTGATGGTCTTGCCAGT 15472 >seq397 Length=203225 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || ||||| |||||| Sbjct 148997 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 149056 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || |||||| ||||| |||||||| || |||||||| | || ||| | ||| Sbjct 149057 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 149116 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||||| ||||| ||||| Sbjct 149117 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 149175 >seq784 Length=190714 Score = 123 bits (136), Expect = 5e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || |||||||||||||| |||| Sbjct 31053 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGA 31112 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||||| || || |||||| || Sbjct 31113 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 31172 Query 282992 AATACCCTCCTTGTCT 283007 |||||||||||||||| Sbjct 31173 AATACCCTCCTTGTCT 31188 >seq510 Length=829487 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| ||| |||| | |||||||| | | || ||| Sbjct 268541 AGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCGAAGCTGATGT 268600 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | | || || || ||||| |||||||| | | ||||| || || || |||| | Sbjct 268601 GCGAGTACATTGAGTTCGTTGCTGATCGCCTGCTGGTGGCCCTCGGTAACAAGAAGTACT 268660 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| | |||||||||| || |||||| ||| || || || || || |||| Sbjct 268661 ACAACGCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 268720 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | | ||||| Sbjct 268721 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 268760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046723294143644