Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq876 174 4e-38 seq397 111 4e-19 seq784 93.3 1e-13 >seq876 Length=62397 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || ||||| || ||||| ||||| || || |||||||| Sbjct 14978 CAGATTTTCGTCAAGACCCTAACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCAGAT 14919 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| ||||| || || || || ||||| |||||||| Sbjct 14918 ACTATTGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAG 14859 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| |||||||| | ||||| | ||||| || || Sbjct 14858 CGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAATATC 14799 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| ||||| || ||||| Sbjct 14798 CAAAAAGAATCTACACTTCACCTTGT 14773 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || |||||||| ||||| || ||||| || ||| ||| Sbjct 14750 CAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCCGAC 14691 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || ||||| || || |||||||| || ||||| Sbjct 14690 ACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCTGATCAGCAG 14631 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || |||||||| || || || | |||||| | || |||||| | Sbjct 14630 CGCTTGATCTTCGCTGGCAAACAGCTTGAGGACGGCCGTACTCTTTCTGACTATAACATT 14571 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 14570 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 14541 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || || ||||||||||| || || |||||||||| Sbjct 15199 TCGTTAAGACCCTGACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCG 15140 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || ||||| || ||||| || || || ||||| |||||||| || |||| Sbjct 15139 ACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTTA 15080 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||||||| || ||||| ||||| || | || ||| | || || || | || |||| Sbjct 15079 TCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCTGACTACAATATTCAGAAAG 15020 Query 178111 AATCAACACTGCATCTTGT 178129 |||| ||||| || ||||| Sbjct 15019 AATCGACACTCCACCTTGT 15001 >seq397 Length=203225 Score = 111 bits (122), Expect = 4e-19 Identities = 135/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 149176 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 149120 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| ||||| || || || || || || |||||||| || Sbjct 149119 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCG 149060 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | || || ||| || ||| |||| Sbjct 149059 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 149000 Query 178106 AAA 178108 || Sbjct 148999 GAA 148997 >seq784 Length=190714 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || || || |||||||| || || ||||||||||| || |||||||| Sbjct 31187 GACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 31128 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | ||||| ||| ||||||| || || || || || || || Sbjct 31127 GATGGCCGCACTCTTTCTGATTACAACATCCAAAAGGAGTCGACCCTTCACCTCGT 31072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203712908552084