Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq49 141 8e-29 seq14 107 2e-18 seq84 87.8 2e-12 >seq49 Length=283267 Score = 141 bits (156), Expect = 8e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||| ||||| || ||||| || |||||||| || || | ||| || || Sbjct 22258 CAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTC 22317 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || |||||| |||| | ||||||||||||||||| |||||||||||||| Sbjct 22318 CTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTC 22377 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || || || | |||| |||||| | | ||||||||| | || | || Sbjct 22378 TTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGT 22437 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||||||| || || || ||||||||||| Sbjct 22438 TTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22470 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||| | |||||| |||||||| || |||||||| | ||| || ||| || ||||| Sbjct 22495 GTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTG 22554 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || |||||||| || ||||| ||||||||||| || || || Sbjct 22555 CTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTT 22614 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | || || | ||||||||| |||| || | || || ||||| Sbjct 22615 GCTCTTGACGTTATCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTCTTTCCGGT 22674 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || ||||||||||| Sbjct 22675 CAGGGTCTTGACGAAAATCTGCAT 22698 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| || ||||| ||||| |||||||| | ||||| ||||| ||||| Sbjct 22723 GTGGAGTGTCGATTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCCTCAAGCTG 22782 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || |||||||| || ||||| ||||||||||||||| || || Sbjct 22783 CTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGGATCTT 22842 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||||||||| | ||| | || || ||||| Sbjct 22843 GGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTCTTTCCGGT 22902 Query 118715 CAGAGTTTTTAC 118726 ||| || || || Sbjct 22903 CAGGGTCTTAAC 22914 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || |||||||| || || || || || | ||||| ||||| Sbjct 23004 ACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCCTCA 23063 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| |||||| |||| | ||||||||||| ||||| || ||||||||||| Sbjct 23064 AGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCCTGG 23123 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| || || || ||| ||||||| ||| | || ||| Sbjct 23124 ATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGTCTTG 23183 Query 118710 CCGGT 118714 || || Sbjct 23184 CCAGT 23188 >seq14 Length=966768 Score = 107 bits (118), Expect = 2e-18 Identities = 135/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| ||||| ||| |||| Sbjct 62598 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62657 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 || |||||||| || || || ||||||||||| | ||| | | || || || || | | Sbjct 62658 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGA--TCTTGGTCTTGACGTTGT 62715 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 62716 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 62775 Query 118729 AA 118730 || Sbjct 62776 AA 62777 >seq84 Length=371308 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| |||||||||||| || || Sbjct 307868 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 307809 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| || |||||||| || || || || ||||||||||||| Sbjct 307808 GCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTG 307763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828507143736