Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq49 141 8e-29
seq14 107 2e-18
seq84 87.8 2e-12
>seq49
Length=283267
Score = 141 bits (156), Expect = 8e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||| ||||| || ||||| || |||||||| || || | ||| || ||
Sbjct 22258 CAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTC 22317
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || |||||| |||| | ||||||||||||||||| ||||||||||||||
Sbjct 22318 CTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTC 22377
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || || || | |||| |||||| | | ||||||||| | || | ||
Sbjct 22378 TTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGT 22437
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| |||||||| || || || |||||||||||
Sbjct 22438 TTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22470
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||| | |||||| |||||||| || |||||||| | ||| || ||| || |||||
Sbjct 22495 GTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTG 22554
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| || |||||||| || ||||| ||||||||||| || || ||
Sbjct 22555 CTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTT 22614
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | || || | ||||||||| |||| || | || || |||||
Sbjct 22615 GCTCTTGACGTTATCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTCTTTCCGGT 22674
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || |||||||||||
Sbjct 22675 CAGGGTCTTGACGAAAATCTGCAT 22698
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||| || ||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct 22723 GTGGAGTGTCGATTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCCTCAAGCTG 22782
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| || |||||||| || ||||| ||||||||||||||| || ||
Sbjct 22783 CTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGGATCTT 22842
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| | ||||||||| | ||| | || || |||||
Sbjct 22843 GGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTCTTTCCGGT 22902
Query 118715 CAGAGTTTTTAC 118726
||| || || ||
Sbjct 22903 CAGGGTCTTAAC 22914
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || |||||||| || || || || || | ||||| |||||
Sbjct 23004 ACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCCTCA 23063
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| |||||| |||| | ||||||||||| ||||| || |||||||||||
Sbjct 23064 AGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCCTGG 23123
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| || || || ||| ||||||| ||| | || |||
Sbjct 23124 ATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGTCTTG 23183
Query 118710 CCGGT 118714
|| ||
Sbjct 23184 CCAGT 23188
>seq14
Length=966768
Score = 107 bits (118), Expect = 2e-18
Identities = 135/182 (74%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| ||||| |||||||||||| ||||| ||| ||||
Sbjct 62598 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62657
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668
|| |||||||| || || || ||||||||||| | ||| | | || || || || | |
Sbjct 62658 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGA--TCTTGGTCTTGACGTTGT 62715
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| |||||| | |||||| |||| ||| | || || || ||||| || || || |
Sbjct 62716 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 62775
Query 118729 AA 118730
||
Sbjct 62776 AA 62777
>seq84
Length=371308
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||||||||| | |||||| |||||||||||| || ||
Sbjct 307868 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 307809
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||| |||| || |||||||| || || || || |||||||||||||
Sbjct 307808 GCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTG 307763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828507143736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |