Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq294 333 2e-86 seq145 145 7e-30 seq49 98.7 9e-16 >seq294 Length=501725 Score = 333 bits (368), Expect = 2e-86 Identities = 664/976 (68%), Gaps = 6/976 (1%) Strand=Plus/Plus Query 23004 CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACG 23063 ||||||| | || ||||| || ||||| ||||| || |||||||| || || Sbjct 123387 CAACAAAGGTAGGGAGGGCGAGGGAAGCAAGGTTGCAGACAGCCACCTCATCAGGGGCAC 123446 Query 23064 TGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGT 23123 ||||||| || || ||||| || || ||| | || || |||| || |||||| Sbjct 123447 TGTACTCAACGATCTCGGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGT 123506 Query 23124 TGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCG 23183 | || || ||||| | |||||||||||||||| | || | || ||||| ||| | Sbjct 123507 TACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAG 123566 Query 23184 ACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCT 23242 ||||| || || ||| | ||||||| | | ||| || | | ||| ||| Sbjct 123567 CCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATG-GTCTTGCGACCACGGCCCTCT 123625 Query 23243 TCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGG 23301 | |||||||| ||| | || || || || |||| || ||| || ||||| ||||| Sbjct 123626 TGCTCGTACTGGGCGTAGAGAGCATCGAACTCATCACCATAGACA-TCAGCCAGTCCGGG 123684 Query 23302 CGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAG 23361 | || | || || | ||| |||| || |||||||| |||| || || Sbjct 123685 GGCTTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAG 123744 Query 23362 ATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTT 23421 ||| || |||| | |||||||||||| || || || || |||||||| |||||| ||| Sbjct 123745 ATCGGGGGTCCACAAAGCGTAGAACAGGTCACGAGCACGAACCTCCTCCTTGCCGTGGTT 123804 Query 23422 CTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAA 23481 ||| || ||| | || || || || || || ||||||||||| ||||| | |||||| Sbjct 123805 CTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAA 123864 Query 23482 CGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCT 23541 || || || | ||| || || ||||| || ||||| || || |||||||| |||| | Sbjct 123865 GGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAACACACG 123924 Query 23542 TAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTG 23600 ||||| || |||| ||||||||| | |||| | || ||| | ||||| | | Sbjct 123925 GAGCATGGGAACGATACCGTTGGAGGAGCCG-TTGGTTCCACCAATGTAAGAACCGGTAG 123983 Query 23601 CTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATT 23660 | |||| | ||| |||| | ||| || || || | | || || ||||| || || Sbjct 123984 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 124043 Query 23661 GTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACG 23720 || |||||||||||||| ||||| ||||||||| | | |||||||||| || | Sbjct 124044 TCTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGAAGCAAG 124103 Query 23721 AAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGT 23780 | | || || | || ||| |||||||| |||||| || ||| |||||| || |||| Sbjct 124104 ATGCCAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGT 124163 Query 23781 ATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATAC 23840 | | ||||| | | ||| || || ||||| ||||||||||| ||||| || | Sbjct 124164 ACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTC 124223 Query 23841 CGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGA 23900 ||| || || ||||| | || || || || | ||| | ||||||||| | Sbjct 124224 CGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTTAATCCGAA 124283 Query 23901 ACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 || |||||||| | | || || ||||| || ||| ||||| |||||||| |||| Sbjct 124284 GAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGT 124343 Query 23961 GCACTATGGCCGAATT 23976 ||| ||||| || || Sbjct 124344 ACACAATGGCGGAGTT 124359 >seq145 Length=451939 Score = 145 bits (160), Expect = 7e-30 Identities = 268/384 (70%), Gaps = 8/384 (2%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGC 57967 |||||||||||||| | ||| | || ||||| || | ||| | | | || ||||| Sbjct 92490 ATCGCCAAGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGA-GTCAACCTTCGC 92432 Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 | | || | || |||||||| ||||| ||||| ||||| || ||| ||||| | Sbjct 92431 TTCGCGTCTGGTTGCATTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCGTTTGCCTC 92372 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || || ||| ||||||| || || |||||||| || || || || ||||||| |||| Sbjct 92371 CATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGAT 92312 Query 58088 ATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT-TGTCA 58146 || || |||||||||||||| ||||| ||||| ||||| ||| ||| ||||| || Sbjct 92311 CTCTCGTGACGAGGGTCTCCACACTGACTTTGCTTGCCTGCTGTTCTCCCACATGAACCA 92252 Query 58147 ATAAACCGACGC-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAAT 58205 ||||| | | | | | ||| ||||| |||||| |||| |||||| | Sbjct 92251 CCGCCCCGACCCTAAGGTTG--TACAGGATATTATTGTCGAGGCCGTCGGCATCGAACAG 92194 Query 58206 GAGTTTGTCACCGAAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTC 58264 ||||| | || || || | | || | || | |||| || |||||| | |||||| Sbjct 92193 GAGTTCCTGACTGACGCTCTTCCCTGCGGTC-TGCTTGGCATGAACTCCAAGCTGATGTG 92135 Query 58265 AAAGTACATTGAGTTTGTTGCCGA 58288 ||||||||||||| ||||| || Sbjct 92134 CGAGTACATTGAGTTCGTTGCTGA 92111 Score = 87.8 bits (96), Expect = 2e-12 Identities = 198/295 (67%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| ||||| || || ||||||| || || | || || Sbjct 92887 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCTGAGGAGATCGATCTC 92828 Query 57630 TCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 ||||||||||| ||| ||| | ||| || || |||| | | || || Sbjct 92827 TCTAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATCTCC 92768 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| |||| || |||||||| ||||| ||||| || |||||||| | |||| || Sbjct 92767 CACGTCCTGGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTTGTCG--AGC 92710 Query 57747 TTTTCA--CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 ||||| ||| || || | | ||||| | ||||| || || || || | | Sbjct 92709 GTTTCAGTTCAGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTATGGCTTCCAGATCATGA 92650 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 | || ||| | || || || | || || || |||||||| || || | ||||| Sbjct 92649 TGGAGAACATCCACTCCGAGACATACTCCCTGCTCATCGACACCTATATTAAGGA 92595 >seq49 Length=283267 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| || ||||| ||||| | || || || | ||| Sbjct 22470 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCC 22411 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||| ||| | || ||||| ||| Sbjct 22410 GACACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAG 22351 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||||||||| ||| | || ||| ||| | || |||||| Sbjct 22350 CAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGACTATAAC 22291 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || ||||| || ||||| | | ||| | ||||| Sbjct 22290 ATTCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGG 22244 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| || || || ||||| |||| || || || Sbjct 22698 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 22639 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 || | | | || | ||||| ||| || | | ||| ||||| ||| | || || ||| Sbjct 22638 GATACTATTGATAACGTCAA---GAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGAC 22582 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| | ||||| ||| | ||||| Sbjct 22581 CAGCAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTAC 22522 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || ||||||||||| || ||||| || || || Sbjct 22521 AATATCCAAAAAGAATCTACACTTCACCTTGTCCT 22487 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || || || || ||| | || || || ||||||||| ||| Sbjct 22916 TCGTTAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTCGAGTCGTCCGACACCATCG 22857 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || | || |||||||| ||| | || || ||||||||||| || | Sbjct 22856 ACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTTA 22797 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||| ||||| ||| | || ||| | || | ||||| || ||||| |||| Sbjct 22796 TCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTTTCTGATTACAATATTCAGAAAG 22737 Query 31383 AATCGACTCTTCATCTGGTACT 31404 ||||||| || || || || || Sbjct 22736 AATCGACACTCCACCTTGTCCT 22715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764405195360