Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq294 132 6e-26
seq145 89.7 6e-13
>seq294
Length=501725
Score = 132 bits (146), Expect = 6e-26
Identities = 664/1047 (63%), Gaps = 12/1047 (1%)
Strand=Plus/Plus
Query 63042 tgattactctttttGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101
|| |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| ||
Sbjct 123503 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 123562
Query 63102 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT 63160
|||| || | ||| || | ||||| | || ||||||| || | || | | |
Sbjct 123563 TGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGACCACGG 123619
Query 63161 TTCTCTT--TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63218
||||| ||||| | | || | |||||||| || || | |||| ||| |
Sbjct 123620 CCCTCTTGCTCGTACTGGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGT 123679
Query 63219 CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63278
| || ||| | || || | | | ||| || |||| ||| || || |||||
Sbjct 123680 CCGGGGGCTTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATG 123739
Query 63279 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCT 63338
|||||||| || |||| | ||| || || || | | | | ||||| || ||
Sbjct 123740 AAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGAGCACGAACCTCCTCCTTGCCG 123799
Query 63339 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398
||||| |||||||||||| | | | ||| | |||||||| |||| ||| |||
Sbjct 123800 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATG 123859
Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458
|| | | ||||| || ||||| || ||||| || | ||| | |||||||| ||| |
Sbjct 123860 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAAC 123919
Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518
|| | | ||| |||| |||||||| || || ||||| || || || ||
Sbjct 123920 ACACGGAGCATGGGAACGATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 123979
Query 63519 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
| || ||||| | ||||| || || || || | || ||||| | ||
Sbjct 123980 GTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCA 124039
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| || | ||||| ||||| || || ||||| || || ||| || | | ||
Sbjct 124040 CAGGTCTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGAAG 124099
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| | || ||| | | | ||| | ||||| || | || || || ||||| ||
Sbjct 124100 CAAGATGCCAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTG 124159
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63758
|| | || | || | | | ||| |||||||| || || || ||| |||
Sbjct 124160 AAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 124219
Query 63759 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATT 63818
||||| || || |||||||| | || |||||| || | ||| ||| ||| ||| ||
Sbjct 124220 ATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTTAATC 124279
Query 63819 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63878
| | ||| || || | || || || || || ||||||| ||||| ||
Sbjct 124280 CGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGG 124339
Query 63879 TCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATA 63938
||||| | ||| | || ||||||| || || || |||| || | | | || |
Sbjct 124340 TCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTC 124398
Query 63939 C-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTC 63997
| |||| || || |||| | | || || || || || ||||| | | | | |||
Sbjct 124399 CTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGA 124458
Query 63998 CATCACTTCA-CTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055
|| || || | | ||| | ||||| |||| |||||| || || || | ||| || |
Sbjct 124459 GATGAC--CATCGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTGGAAACGGCGATACGT 124516
Query 64056 GCGGCTAGAATGGCATAATCCGGATGT 64082
|| || |||||||| || || || |||
Sbjct 124517 GCAGCCAGAATGGCGTAGTCGGGGTGT 124543
>seq145
Length=451939
Score = 89.7 bits (98), Expect = 6e-13
Identities = 112/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || || || || || ||| ||||||||||| | | || | ||||| ||
Sbjct 92267 AACAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 92326
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| || ||||| || |||||||| || ||||| || ||||| || || || ||
Sbjct 92327 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCA 92386
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || || || || ||||
Sbjct 92387 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 92420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629814781566240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |