Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq49 116 9e-21 >seq49 Length=283267 Score = 116 bits (128), Expect = 9e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | ||| ||||||||||||||||| || ||| Sbjct 22697 ATACCACCACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAATCA 22756 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | |||||| || || || || || || || || || | ||| || |||||| Sbjct 22757 GAAAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 22816 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || || || ||||| | || ||||| || | ||| ||| | || Sbjct 22817 GGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCG 22876 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553 ||||| || ||||| ||||| || || || || || || | ||| Sbjct 22877 ACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTAACGACTAT 22920 Score = 116 bits (128), Expect = 9e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || |||||||| ||||||||||| || || || | |||||| Sbjct 23000 AAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTC 23059 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| ||||| || || | | ||| ||||||||||| || || || || || Sbjct 23060 CTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTC 23119 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| | || || || || | ||||| || | || ||||| || || || || Sbjct 23120 CTGGATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGT 23179 Query 104527 CTTACCAGT 104535 ||| ||||| Sbjct 23180 CTTGCCAGT 23188 Score = 107 bits (118), Expect = 4e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | |||||||||||| || ||||| || || Sbjct 22469 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCC 22528 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||| || || || || || || || || | ||| || |||||| Sbjct 22529 GAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 22588 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGT-T 104507 || || || || |||||||| ||| ||||| || || || || | ||||| || | | Sbjct 22589 GGAATGCCCTCCTTATCCTGGATC-TTGCTCTTGACGTTATCAATAGTATC-TGAGCTCT 22646 Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || || || || ||||| || || || || || || || |||||||| Sbjct 22647 CGACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22698 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| ||||||||||| ||||| | ||||| || || || || ||| Sbjct 22274 GTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCA 22333 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| ||||| ||||| || || || || || || ||||| | || Sbjct 22334 GCGAAGATCAAGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTC 22393 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| | || ||||| || || || || || || || || || Sbjct 22394 ACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTC 22453 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 22454 TTGACGAAAATCTGCAT 22470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393118679464