Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq188 179 6e-41 seq21 161 2e-35 >seq188 Length=169041 Score = 179 bits (198), Expect = 6e-41 Identities = 189/246 (77%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || ||||| || |||||||||||||| || | Sbjct 9494 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATTCAGGGAATCACCAAGCCGGCCA 9436 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || |||||||| || ||||||||| |||| | || |||| || |||| Sbjct 9435 TCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 9376 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || |||| |||| ||| ||| || ||| |||| Sbjct 9375 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 9316 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| |||||||| ||||||||| | || ||||||| || | || || || | Sbjct 9315 AGCACGCTAAGCGTAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 9256 Query 16671 GCCGTA 16676 |||||| Sbjct 9255 GCCGTA 9250 >seq21 Length=211742 Score = 161 bits (178), Expect = 2e-35 Identities = 188/251 (75%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 63825 GCCAAGCGCCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 63883 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 63884 TCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 63943 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 63944 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 64003 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 64004 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 64063 Query 16672 CCGTAAGATTT 16682 ||||||| ||| Sbjct 64064 CCGTAAGTTTT 64074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074872678094