Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq294 145 1e-29 seq145 102 1e-16 >seq294 Length=501725 Score = 145 bits (160), Expect = 1e-29 Identities = 667/1047 (64%), Gaps = 12/1047 (1%) Strand=Plus/Plus Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 123503 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 123562 Query 63051 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT 63109 |||| || | ||| || | ||||| | || ||||||| || | || | | | Sbjct 123563 TGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGACCACGG 123619 Query 63110 TTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63167 ||||| ||||| | | || | |||||||| || || | |||| ||| | Sbjct 123620 CCCTCTTGCTCGTACTGGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGT 123679 Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 || || ||| | || || | | | ||| || |||| ||| || || ||||| Sbjct 123680 CCGGGGGCTTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATG 123739 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 |||||||| || |||| | ||| || || || | | | | ||||| || || Sbjct 123740 AAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGAGCACGAACCTCCTCCTTGCCG 123799 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 ||||| |||||||||||| | | | ||| | |||||||| |||| ||| ||| Sbjct 123800 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATG 123859 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | ||||| || ||||| || ||||| || | ||| | |||||||| ||| | Sbjct 123860 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAAC 123919 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | | ||| |||| |||||||| || || ||||| || || || || Sbjct 123920 ACACGGAGCATGGGAACGATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 123979 Query 63468 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63527 | || ||||| | ||||| || || || || | || ||||| | || Sbjct 123980 GTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCA 124039 Query 63528 CATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63587 || || | ||||| ||||||||||| ||||| || || ||| || | | || Sbjct 124040 CAGGTCTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGAAG 124099 Query 63588 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63647 || | || ||| | | ||| | ||||| || | || || || ||||| || Sbjct 124100 CAAGATGCCAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTG 124159 Query 63648 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63707 || | || | || | | | ||| |||||||| || || || ||| ||| Sbjct 124160 AAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 124219 Query 63708 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63767 ||||| || || |||||||| | || |||||| || | ||| | | ||| ||| || Sbjct 124220 ATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTTAATC 124279 Query 63768 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63827 | | ||| || || | || || || || || ||||||| ||||| || Sbjct 124280 CGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGG 124339 Query 63828 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATA 63887 ||||| | ||| | |||||||| | || || || |||| || | | | ||| | Sbjct 124340 TCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTC 124398 Query 63888 C-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTC 63946 | |||| || || |||| | | || || || || || ||||| | | | | ||| Sbjct 124399 CTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGA 124458 Query 63947 CATCACTTCA-CTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 64004 || || || | | ||| | ||||| |||| |||||| || || || ||||| || | Sbjct 124459 GATGAC--CATCGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTGGAAACGGCGATACGT 124516 Query 64005 GCGGCTAGAATGGCATAATCCGGATGT 64031 || || |||||||| || || || ||| Sbjct 124517 GCAGCCAGAATGGCGTAGTCGGGGTGT 124543 >seq145 Length=451939 Score = 102 bits (112), Expect = 1e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || || || || ||| ||||||||||| | | || || |||||||| Sbjct 92267 AACAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 92326 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| || |||||||| || ||||| || ||||| || || || ||| Sbjct 92327 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCA 92386 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || || || |||| Sbjct 92387 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 92420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944412311280