Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq351 132 3e-26
seq71 98.7 7e-16
seq49 89.7 3e-13
>seq351
Length=3264
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2428 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2369
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 2368 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2336
>seq71
Length=398081
Score = 98.7 bits (108), Expect = 7e-16
Identities = 199/293 (68%), Gaps = 12/293 (4%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | || | || ||||||||||| ||||| |||||||
Sbjct 107908 TTCTATCGCTACAAGATG--GAAAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 107851
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314
|||| ||||| | ||||| |||||| || || || | ||| | || ||| |
Sbjct 107850 TTAAGACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGTCGGCCTCCT 107795
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
| || | | || || ||||| | |||||||| || ||| | | | | | |
Sbjct 107794 GCATATCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCC 107735
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| | ||||| || || || | ||||||| ||||| | || |||
Sbjct 107734 GACGACCGTTGGATCATCAACGGCTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 107675
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || |||||| ||||| || | ||||| | ||||| ||||||||
Sbjct 107674 GGCTTCATCTCCAAGTTCGTGCTCTGCAAGAAATGCAAGAACCCTGAGACCGA 107622
>seq49
Length=283267
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| || | || ||||||||||| || |||||| |||||| ||||| || || |||||
Sbjct 22244 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAA 22303
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | ||| |||| || | || || || || || || | ||| || ||||||| |||
Sbjct 22304 AGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGG 22363
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || ||||| || || |||||| || | || || || || ||
Sbjct 22364 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACC 22423
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | || || ||||| || |||| ||| || ||||| ||||||||
Sbjct 22424 TCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945738583498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |