Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq351 132 3e-26 seq71 98.7 7e-16 seq49 89.7 3e-13 >seq351 Length=3264 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 2428 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2369 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 2368 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2336 >seq71 Length=398081 Score = 98.7 bits (108), Expect = 7e-16 Identities = 199/293 (68%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | || | || ||||||||||| ||||| ||||||| Sbjct 107908 TTCTATCGCTACAAGATG--GAAAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 107851 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314 |||| ||||| | ||||| |||||| || || || | ||| | || ||| | Sbjct 107850 TTAAGACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGTCGGCCTCCT 107795 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 | || | | || || ||||| | |||||||| || ||| | | | | | | Sbjct 107794 GCATATCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCC 107735 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| || || || | ||||||| ||||| | || ||| Sbjct 107734 GACGACCGTTGGATCATCAACGGCTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 107675 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || |||||| ||||| || | ||||| | ||||| |||||||| Sbjct 107674 GGCTTCATCTCCAAGTTCGTGCTCTGCAAGAAATGCAAGAACCCTGAGACCGA 107622 >seq49 Length=283267 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||||||||||| || |||||| |||||| ||||| || || ||||| Sbjct 22244 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAA 22303 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | ||| |||| || | || || || || || || | ||| || ||||||| ||| Sbjct 22304 AGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGG 22363 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || ||||| || || |||||| || | || || || || || Sbjct 22364 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACC 22423 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || ||||| || |||| ||| || ||||| |||||||| Sbjct 22424 TCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945738583498