Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq49 113 4e-20
>seq49
Length=283267
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 25005 ATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACT 25064
||| | || ||||| ||||||| || |||| || | || || |||||||| |||||
Sbjct 22920 ATAGTCGTTAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTCGAGTCGTCCGACACC 22861
Query 25065 ATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
||||| ||||| || ||| ||||| || || ||||| |||||||| |||||
Sbjct 22860 ATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCTGACCAGCAGCGC 22801
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
|||| || |||||||| || | || || | |||||| | ||||||||||||||
Sbjct 22800 CTTATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTTTCTGATTACAATATTCAG 22741
Query 25185 AAAGAATCCACGCTACA 25201
|||||||| || || ||
Sbjct 22740 AAAGAATCGACACTCCA 22724
Score = 109 bits (120), Expect = 5e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||||| || | ||||| ||||||| ||| ||
Sbjct 22698 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 22639
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| ||||| || | || | ||| || ||| || || || || ||||| ||||||||
Sbjct 22638 GATACTATTGA-TAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCA 22580
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| |||| || |||||||| || | ||||||| || ||| | ||||||||
Sbjct 22579 GCAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAA 22520
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||| ||||||||||| || || ||
Sbjct 22519 TATCCAAAAAGAATCTACACTTCA 22496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326109335770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |