Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq49 107 2e-18
seq84 87.8 2e-12
>seq49
Length=283267
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| || || |||| || ||||| || | | |
Sbjct 22698 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 22639
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | |||| || || || || |||||||| ||||| || || ||
Sbjct 22638 GATACTATTGATAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 22579
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || |||||||| ||| | || ||| ||| || |||| ||||||||
Sbjct 22578 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 22519
Query 22399 ATTCAAAAAGAATCCAC 22415
|| ||||||||||| ||
Sbjct 22518 ATCCAAAAAGAATCTAC 22502
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| ||||| |||| ||||| || || || ||
Sbjct 22470 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCC 22411
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || |||||||||||||| || || ||||||||
Sbjct 22410 GACACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAG 22351
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||| ||| | ||||| ||| || | || || || |||
Sbjct 22350 CAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGACTATAAC 22291
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || ||||| | || | || ||||| |||| || ||
Sbjct 22290 ATTCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGG 22244
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290
||||| || | ||||| || || | || ||||| || || | |||| ||| | |||
Sbjct 22914 GTTAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTCGAGTCGTCCGACACCATCGAC 22855
Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350
|| | || || || |||||||||||||| ||||| || || || || || |||||
Sbjct 22854 AATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTTATC 22795
Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410
|| |||||||| ||| | ||||| ||||| | || |||||||| ||||| ||||||
Sbjct 22794 TTCGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTTTCTGATTACAATATTCAGAAAGAA 22735
Query 22411 TCCAC 22415
|| ||
Sbjct 22734 TCGAC 22730
>seq84
Length=371308
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||||||||| || || || || || || || || |||||||| ||| | ||
Sbjct 307764 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 307823
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
|||| |||||| | || ||||||||||| || || || || |||
Sbjct 307824 GGATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCGACC 307869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726168674270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |