Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq49 145 2e-29 seq14 116 9e-21 >seq49 Length=283267 Score = 145 bits (160), Expect = 2e-29 Identities = 173/231 (75%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || ||||||||||||||| || || | | Sbjct 22472 CCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAG 22531 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | || || || |||||||| || ||||| || | || Sbjct 22532 AGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 22591 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || || || ||||||||||| || ||| || ||||| || |||| ||| |||| || Sbjct 22592 ATGCCCTCCTTATCCTGGATCTT-GCTCTTGACGTTATCAATAGTATCTGAGCTC---TC 22647 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||||||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 22648 GACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22698 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | ||| || || || | ||| ||||| |||||||||||||| | Sbjct 22986 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAA 23045 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | ||||| || |||||||||| ||||| ||| | ||| Sbjct 23046 AGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGG 23105 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || |||| ||| || || || || Sbjct 23106 ATCCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACC 23165 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 ||||| ||||| ||||| || || Sbjct 23166 TCGAGGGTGATGGTCTTGCCAGT 23188 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| | || || || ||||| || | || || || |||||| Sbjct 22280 TCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 22339 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||| ||| ||||| || || || || ||||| || | |||||||| Sbjct 22340 ATCAAGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTA 22399 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || |||||||| || || |||||||| ||||||||| Sbjct 22400 TCGATGGTGTCGGAGGACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACG 22459 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 22460 AAAATCTGCAT 22470 >seq14 Length=966768 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || ||||| ||||||||| Sbjct 62598 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62657 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || | || || || || ||||||||||| || | || ||||| || Sbjct 62658 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 62717 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 62718 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 62776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648989072724