Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq49 105 7e-18 seq14 96.9 4e-15 >seq49 Length=283267 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||||||||| || | ||| |||||| ||||| || || |||| ||||| || | Sbjct 22255 ACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCC 22314 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| |||||||| || | |||||||| |||| || | || |||||| Sbjct 22315 GTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGGATGCCCTCCTT 22374 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || || | | | | |||||| || || || || | |||||| Sbjct 22375 GTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCAAGCGTGAT 22434 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || ||||| || || || ||||| Sbjct 22435 TGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22470 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || ||||| ||||||||||| | ||||| || | || || |||||||| || ||||| Sbjct 22508 TCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAG 22567 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | || |||||| ||| ||| || |||| | Sbjct 22568 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTA 22627 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | || || |||| || || |||| |||||| || || || || || ||||| Sbjct 22628 TCAATAGTATCTGAGCTC---TCGACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTG 22684 Query 42195 ACAAAGATTTGCAT 42208 || || || ||||| Sbjct 22685 ACGAAAATCTGCAT 22698 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || |||||||||||||||| || || || |||| || |||||||| || ||||| Sbjct 22736 TCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAG 22795 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | || ||||||||| ||| || || | | Sbjct 22796 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTG 22855 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||| || || || | || ||||| || || || || ||||| || Sbjct 22856 TCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 22914 >seq14 Length=966768 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 62596 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62655 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | || |||||| ||| ||| || |||| ||| | Sbjct 62656 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 62714 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 62715 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62774 Query 42198 AA 42199 || Sbjct 62775 AA 62776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210369122720