Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq14 132 5e-26
seq49 131 2e-25
seq84 98.7 1e-15
>seq14
Length=966768
Score = 132 bits (146), Expect = 5e-26
Identities = 140/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| |
Sbjct 62596 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62655
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| |
Sbjct 62656 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 62714
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || ||||| | || ||||| || |||||||| || || ||
Sbjct 62715 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62774
Query 46583 AA 46584
||
Sbjct 62775 AA 62776
>seq49
Length=283267
Score = 131 bits (144), Expect = 2e-25
Identities = 170/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418
|||| | ||| || | | |||||||||||| || | || |||||| || || || |
Sbjct 22236 ATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTAT 22295
Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478
|||| || ||||| || |||| || ||||||||||| ||||| |||||||||||||| |
Sbjct 22296 AGTCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGAT 22355
Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538
||| || | || ||||||||| |||||| ||| | | | | |||||| |
Sbjct 22356 CGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGG 22415
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || || || | |||||| ||||| || ||||| || || || || || |||||
Sbjct 22416 ACTCGACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22470
Score = 109 bits (120), Expect = 6e-19
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || ||| | || || || | |||| || |||||||||||||| || ||
Sbjct 22472 CCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAG 22531
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || | || || ||||||||||||||||| || | |||||||||||| | ||
Sbjct 22532 AGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 22591
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| || |||||| ||| |||||| |||||| | | | || || |||| ||
Sbjct 22592 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTATCAATAGTATCTGAGCTC---TCG 22648
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | |||||| || || || ||||| || || || || || |||||
Sbjct 22649 ACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22698
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || |||||||| ||||| || || ||||| |||| || ||||| ||||| |||||
Sbjct 23021 CTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAA 23080
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||||||||||||| || | || | | |||||||||| ||||||| ||| | |||
Sbjct 23081 GATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGACTT-AACGT 23139
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || || || || || || || | |||||||| ||||| ||
Sbjct 23140 TGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 23188
Score = 102 bits (112), Expect = 9e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| || || |||||||| || || || ||||| |||| || |||||||||||||||||
Sbjct 22736 TCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAG 22795
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 22796 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTG 22855
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| ||| || || || | || ||||| || || ||||| || |||||
Sbjct 22856 TCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 22914
>seq84
Length=371308
Score = 98.7 bits (108), Expect = 1e-15
Identities = 81/99 (82%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| | || ||||||||||||||||||||
Sbjct 307863 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 307804
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| |||||||||||| | || | | |||||||||
Sbjct 307803 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 307765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565235870558160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |