Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq49 129 4e-24 >seq49 Length=283267 Score = 129 bits (142), Expect = 4e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| ||||||||| |||||| | ||| ||||| | ||||| Sbjct 22477 ACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGT 22536 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| ||||| || || || ||||| || || || ||||||||||| || Sbjct 22537 ACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCC 22596 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||| || || ||||| ||||| ||||||||||| | | | | | ||| | Sbjct 22597 CTCCTTATCCTGGATCTTGCTCTTGACGTTATCAATAGTATCTGAGCTCTCGA-CTTCGA 22655 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || ||||| || ||||| |||||||| || Sbjct 22656 GCGTGATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTG 22695 Score = 102 bits (112), Expect = 5e-16 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| ||||| || ||||| |||||| || ||| ||||||| || || Sbjct 22705 ACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAATCAGAAAGCGT 22764 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || ||||| ||||| || || || ||||| || || || ||||||||||| || Sbjct 22765 GCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCC 22824 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||| ||||| || ||| || || || || | | | | |||| Sbjct 22825 CTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGA-CCTCAA 22883 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 ||||||| || || ||||| || |||||||||| Sbjct 22884 GGGTAATGGTCTTTCCGGTCAGGGTCTTAACGA 22916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268163843642984