Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq294 140 5e-27 seq181 123 4e-22 seq145 114 2e-19 seq268 104 4e-16 >seq294 Length=501725 Score = 140 bits (154), Expect = 5e-27 Identities = 288/432 (67%), Gaps = 12/432 (3%) Strand=Plus/Plus Query 2071579 ACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGG 2071636 |||| ||||||||||||||||| | || |||| |||||||||| |||||| || Sbjct 123455 ACGATCTCGGTGCACAGGTTGGAG--CTGCGAATGGTACCCAGGTTCTTCTGGTTACTCT 123512 Query 2071637 TCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGA 2071696 || |||| || ||||||| |||||| |||| ||| ||||| |||| ||| || Sbjct 123513 TCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGA 123572 Query 2071697 CGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCTNNNNN 2071752 ||||| |||| | || | || || | || ||| ||||||| Sbjct 123573 GAATGGCGTACCAGA----GCTTCTGAGCCTTGATGGTCTTGCGACCACGGCCCTCTTGC 123628 Query 2071753 NNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCC 2071812 |||| || || || | | || | | || ||| ||||| || Sbjct 123629 TCGTACTGGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGTCCGGGGGCT 123688 Query 2071813 TCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCG 2071872 ||| ||||| ||||| | |||||| ||| | | | ||||| ||| || || ||| Sbjct 123689 TCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCG 123748 Query 2071873 CACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 2071932 ||||||| |||| || || || || || || ||||||||||||||||||||| Sbjct 123749 GGGGTCCACAAAGCGTAGAACAGGTCACGAGCACGAACCTCCTCCTTGCCGTGGTTCTTC 123808 Query 2071933 TTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 2071992 ||| ||||| | |||| || |||||||||||||||||||||||| ||||||||| Sbjct 123809 CGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCA 123868 Query 2071993 CCCTTGCGCTTG 2072004 || ||||||| Sbjct 123869 CCAGGGCGCTTG 123880 Score = 100 bits (110), Expect = 5e-15 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || ||||| || |||| |||||| || ||||||||||| || | |||||||| Sbjct 123889 CTGGTCAACGTAGCGTGCGGTGTTGTTAAACACACGGAGCATGGGAACGATACCGTTGGA 123948 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||| || | | ||| | || | ||||| | ||| || | || Sbjct 123949 GGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACGTTCAGACC 124008 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| ||||| || | ||||||||| | || || | || || || |||||||| ||||| Sbjct 124009 GATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCGTAGATACCCTC 124068 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| || ||| ||| | || ||||| || | || || | | || | Sbjct 124069 AATGCTGTCCGCGCTCACGTCGACCAAGAAGCAAGATGCCAGCTGGGGTTGGGGAGTAGC 124128 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||| || ||||| Sbjct 124129 GGCATTGAACAGAGTGGG 124146 >seq181 Length=174417 Score = 123 bits (136), Expect = 4e-22 Identities = 94/111 (85%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||| ||||| || |||||| ||||||| || | || ||||||||||| |||||| Sbjct 161315 GCCGCCAATTACCTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCCAAC 161256 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 161255 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 161205 >seq145 Length=451939 Score = 114 bits (126), Expect = 2e-19 Identities = 171/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 91974 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 92033 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 92034 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 92093 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | |||||||| || || ||||| |||||||||| |||||| || || ||||| Sbjct 92094 GGGCCACCAGCAGGCGATCAGCAACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCA 92153 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || | ||| || | || | | ||||| | ||||| ||||||||| Sbjct 92154 TGCCAAGCAGACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGTTCGATGCCGACGGCCT 92213 Query 794131 CGA 794133 ||| Sbjct 92214 CGA 92216 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||| | |||||||||||||| || ||||| ||||| ||||||||||| || || Sbjct 92592 GGCTCCTTAATATAGGTGTCGATGAGCAGGGAGTATGTCTCGGAGTGGATGTTCTCCATC 92651 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||||||||| ||||| Sbjct 92652 ATGATCTGGAAGCCATAGAAGCA 92674 >seq268 Length=485454 Score = 104 bits (114), Expect = 4e-16 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 10752 GTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCACCGGGGAG 10811 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| |||||||| | |||||||||||| |||| Sbjct 10812 GATGAGGCGCACAGAGGTCTGGATCTCCCGGG 10843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916208317907162