Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq145 149 9e-30 seq294 113 6e-19 >seq145 Length=451939 Score = 149 bits (164), Expect = 9e-30 Identities = 218/303 (72%), Gaps = 13/303 (4%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| ||||| || |||||||| |||||| |||| | Sbjct 92888 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCTTTCTGGACCGCTGAGGAGATCGATC 92830 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 92829 TCTCTAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 92774 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| ||||| || |||||| ||| || ||||| ||||||||| | Sbjct 92773 ATCTCCCACGTCCTGGCCTTCTT-CGCCGCTTCCGACGGTATCGTCAACGAGAACCTTGT 92715 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | ||||||||| | || ||||| |||| || || || |||||||| Sbjct 92714 CGAGCGTTTCAGTTCAGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTATGGCTTCCAGAT 92655 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || || ||||| || || ||||||||||| | ||||| Sbjct 92654 CATGATGGAGAACATCCACTCCGAGACATACTCCCTGCTCATCGACACCTATATTAAGGA 92595 Query 1456068 CCC 1456070 || Sbjct 92594 GCC 92592 Score = 105 bits (116), Expect = 1e-16 Identities = 182/259 (70%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 || || ||||||||||||| ||||| | ||||| | | || | || || | Sbjct 92223 ATTATTGTCGAGGCCGTCGGCATCGAACAGGAGTTCCTGACTGACGCTCTTCCCTGCGGT 92164 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| ||| |||||| |||||||||| || || || || |||| Sbjct 92163 CTGCTTGGCATGAACTCCAA-GCTGATGTGCGAGTACATTGAGTTC-GTTGCTGATCGCC 92106 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||||| ||| | ||| Sbjct 92105 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATG 92047 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 92046 GAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 91987 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 91986 AAGGCTGGTGTCATGGCCA 91968 >seq294 Length=501725 Score = 113 bits (124), Expect = 6e-19 Identities = 291/438 (66%), Gaps = 18/438 (4%) Strand=Plus/Minus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || ||||||||| ||||||||| |||||||||||||| || || | | Sbjct 123880 CAAGCGCCCTGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 123821 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || |||||||||||||||| |||| || || || | | || || Sbjct 123820 CCTCGATCTGCGGAAGAACCACGGCAAGGA----GGAGGTTCGTGCTCGTG--ACCTGTT 123767 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| ||||||| ||| || || ||| ||| | | | || | | |||||| | Sbjct 123766 CTACGCTTTGTGGACCCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 123707 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| ||||| ||| || ||||| ||| || |||||| | | || || || Sbjct 123706 ACTCTTCTGCCCCAACGAAGCCCCCGGACTGGCTGATGTCTATGGTGATGAGTTCGATGC 123647 Query 262036 CCTCTATG---AGNNNNNNNNNNNNNNNNNNNNNNCGCG-GACCGTCGTGCCCGCACGAC 262091 ||||| | || ||| |||| || | | || || Sbjct 123646 TCTCTACGCCCAGTACGAGCAAGAGGGCCGTGGT-CGCAAGACCATCAAGGCT-CA-GA- 123591 Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151 || |||||| |||||| ||| ||| || | ||||| || | |||| |||| |||||| Sbjct 123590 AGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACA 123531 Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAA 262209 |||| || |||| || || |||||| |||||||||| |||| || ||| |||| Sbjct 123530 AGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACCATTCG-CAGCT-CCAA 123473 Query 262210 CCTGTGCACCGAGATCGT 262227 |||||||||||||||||| Sbjct 123472 CCTGTGCACCGAGATCGT 123455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177776670241996