Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq49 89.7 3e-13
>seq49
Length=283267
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || |||||||| ||||| || || || || ||| |
Sbjct 22470 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCC 22411
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || | || || |||||
Sbjct 22410 GACACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAG 22351
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| || || || || ||||| || || || |||| || ||| | || || |||
Sbjct 22350 CAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGACTATAAC 22291
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 22290 ATTCAGAAGGAGTCCAC 22274
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || ||||| || ||||| |||||||| || | |
Sbjct 22698 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 22639
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| ||| |||| | | || || || || || || || | || || || ||
Sbjct 22638 GATACTATTGATAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 22579
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || |||||||| || || ||||| | || ||| | ||||||||
Sbjct 22578 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 22519
Query 23791 ATACAAAAAGAGTCCACA 23808
|| |||||||| || |||
Sbjct 22518 ATCCAAAAAGAATCTACA 22501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008125221864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |