Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq49 89.7 3e-13 >seq49 Length=283267 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || |||||||| ||||| || || || || ||| | Sbjct 22470 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCC 22411 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || || ||||| Sbjct 22410 GACACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAG 22351 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || || ||||| || || || |||| || ||| | || || ||| Sbjct 22350 CAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGACTATAAC 22291 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 22290 ATTCAGAAGGAGTCCAC 22274 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| || ||||| |||||||| || | | Sbjct 22698 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCA 22639 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||| | | || || || || || || || | || || || || Sbjct 22638 GATACTATTGATAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 22579 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || |||||||| || || ||||| | || ||| | |||||||| Sbjct 22578 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAAT 22519 Query 23791 ATACAAAAAGAGTCCACA 23808 || |||||||| || ||| Sbjct 22518 ATCCAAAAAGAATCTACA 22501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008125221864