Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq49 152 1e-31 seq350 98.7 2e-15 seq14 89.7 1e-12 >seq49 Length=283267 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || ||||||||||||| ||||||||| | | ||| | |||||| Sbjct 22487 AGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCT 22546 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || || ||||| || ||||| || ||||| || Sbjct 22547 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 22606 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || || || |||||| | || || || | |||||| ||| Sbjct 22607 TGGATCTTGCTCTTGACGTTATCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTC 22666 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| || || | ||| | ||||| Sbjct 22667 TTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22698 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || |||||||| || | ||||||||| | | || | || || Sbjct 22715 AGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCC 22774 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || || ||||| || ||||| || ||||||||| Sbjct 22775 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCT 22834 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || | || || || | || || ||| Sbjct 22835 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTC 22894 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 22895 TTTCCGGTCA 22904 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || |||||||||||||| || || || | || || || | | ||| Sbjct 22249 ACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGT 22308 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| | || || || ||||| || || || Sbjct 22309 ACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGGATGCC 22368 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| |||||| ||||||||||| |||| || || || | Sbjct 22369 CTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCAAG 22428 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || || || |||| || || | ||| | ||||| Sbjct 22429 CGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 22470 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||||||||| ||||| |||| ||| || || | | || | || || Sbjct 23001 AGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCC 23060 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| | || || || || || || || || |||||||| Sbjct 23061 TCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCC 23120 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| || || || || || || | ||||| ||| Sbjct 23121 TGGATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGTC 23180 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 23181 TTGCCAGT 23188 >seq350 Length=2649 Score = 98.7 bits (108), Expect = 2e-15 Identities = 200/293 (68%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| |||| ||||||||| | | || || ||||| | | Sbjct 284 ACTTTATATTTAATGTTTGCATTATTTTCTGGTTTAGTTGGAACAGCGTTTTCAGTTTTA 343 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTT 7558 || || ||||| ||| | | ||| ||| |||| |||| | || ||| || | | Sbjct 344 ATTAGATTAGAGTTATCAGGTCCAGGTGTTCAATATATATCAGAC--AAT---CAGTTAT 398 Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618 | || ||| || || |||||||| | | ||||||||||| | |||||||| | Sbjct 399 ATAATAGTATAATAACAGCGCATGCTATCTTGATGATTTTCTTCATGGTTATGCCTGCAT 458 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | || || ||||| || |||| || | || ||| | |||| | ||| |||||||| | Sbjct 459 TAATTGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTTGGGGGTCCAGATATGGCAT 518 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 |||| || | || |||||||||||||||||| || ||| |||||| || Sbjct 519 TTCCTAGATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 571 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/104 (79%), Gaps = 4/104 (4%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| ||||| ||||||||||||||||| ||||| ||||| || || || || Sbjct 964 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGGTCACCACCACCA 907 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | | ||||| || |||||||| |||||||||||||| || Sbjct 906 GCTACTTCAAAGAATGATGTATTAAAGTTTCTATCAGTTAATAC 863 >seq14 Length=966768 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 62598 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62657 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || ||||| || |||||||| ||| || ||| Sbjct 62658 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 62717 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 62718 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 62776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525730008452