Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01]
358 sequences; 31,026,583 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq49 174 4e-38
seq14 114 3e-20
seq84 87.8 4e-12
>seq49
Length=283267
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || ||||| || ||||| ||||| || || ||||||||
Sbjct 22695 CAGATTTTCGTCAAGACCCTGACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCAGAT 22636
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||||| ||||| || || || || ||||| ||||||||
Sbjct 22635 ACTATTGATAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAG 22576
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||||||||| || ||||| |||||||| | ||||| | ||||| || ||
Sbjct 22575 CGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAATATC 22516
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||||||||| ||||| || |||||
Sbjct 22515 CAAAAAGAATCTACACTTCACCTTGT 22490
Score = 136 bits (150), Expect = 1e-26
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || |||||||| ||||| || ||||| || ||| |||
Sbjct 22467 CAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCCGAC 22408
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| || ||||| || || |||||||| || |||||
Sbjct 22407 ACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAGCAG 22348
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || ||||| || || || | |||||| | || |||||| |
Sbjct 22347 CGCTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGACTATAACATT 22288
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || || || || || |||
Sbjct 22287 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 22258
Score = 134 bits (148), Expect = 3e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || ||||| || || ||||| ||||| || || ||||||||||
Sbjct 22916 TCGTTAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTCGAGTCGTCCGACACCATCG 22857
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || || || ||||| || ||||| || || || ||||| |||||||| || ||||
Sbjct 22856 ACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTTA 22797
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||||||||| || ||||| || || || | || ||| | ||||| || | || ||||
Sbjct 22796 TCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTTTCTGATTACAATATTCAGAAAG 22737
Query 178111 AATCAACACTGCATCTTGT 178129
|||| ||||| || |||||
Sbjct 22736 AATCGACACTCCACCTTGT 22718
Score = 113 bits (124), Expect = 1e-19
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || |||||||||||||| || | || || ||||| ||||| ||
Sbjct 23190 TCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGTGATACTATCGACAACGTTAAGT 23131
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| |||||||| || || |||||||| || ||||| || | |||||||| || |
Sbjct 23130 CGAAGATCCAGGACAAGGAGGGGATCCCTCCTGATCAGCAGCGCTTGATCTTCGCTGGCA 23071
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
||||||| || || || | || ||| | || ||||| |||| ||||| || || || |
Sbjct 23070 AACAGCTTGAGGACGGTCGCACGCTTTCGGACTATAATATCCAGAAAGAGTCCACTCTCC 23011
Query 178123 ATCTTGT 178129
| || ||
Sbjct 23010 ACCTGGT 23004
>seq14
Length=966768
Score = 114 bits (126), Expect = 3e-20
Identities = 136/183 (74%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 62777 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 62721
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| ||||| || || || || || || |||||||| ||
Sbjct 62720 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCG 62661
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| |||||||||||||| |||||||| ||||| | || || ||| || ||| ||||
Sbjct 62660 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 62601
Query 178106 AAA 178108
||
Sbjct 62600 GAA 62598
>seq84
Length=371308
Score = 87.8 bits (96), Expect = 4e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || || || || |||||||| || || ||||||||||| || ||||||||
Sbjct 307765 GACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 307824
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||| | |||||| | ||||| ||| |||| || || || || || || || ||
Sbjct 307825 GATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 307880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203725678635452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |