Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq49 174 4e-38 seq14 114 3e-20 seq84 87.8 4e-12 >seq49 Length=283267 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || ||||| || ||||| ||||| || || |||||||| Sbjct 22695 CAGATTTTCGTCAAGACCCTGACCGGAAAGACAATCACGCTCGAAGTCGAGAGCTCAGAT 22636 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| ||||| || || || || ||||| |||||||| Sbjct 22635 ACTATTGATAACGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAG 22576 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| |||||||| | ||||| | ||||| || || Sbjct 22575 CGCCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTCTCGGATTACAATATC 22516 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| ||||| || ||||| Sbjct 22515 CAAAAAGAATCTACACTTCACCTTGT 22490 Score = 136 bits (150), Expect = 1e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || |||||||| ||||| || ||||| || ||| ||| Sbjct 22467 CAGATTTTCGTCAAGACCCTGACCGGAAAAACAATCACGCTTGAGGTCGAGTCCTCCGAC 22408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || ||||| || || |||||||| || ||||| Sbjct 22407 ACCATCGATAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAGCAG 22348 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||||| || || || | |||||| | || |||||| | Sbjct 22347 CGCTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGACTATAACATT 22288 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 22287 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 22258 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || || ||||| ||||| || || |||||||||| Sbjct 22916 TCGTTAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTCGAGTCGTCCGACACCATCG 22857 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || ||||| || ||||| || || || ||||| |||||||| || |||| Sbjct 22856 ACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTTA 22797 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||||||| || ||||| || || || | || ||| | ||||| || | || |||| Sbjct 22796 TCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTTTCTGATTACAATATTCAGAAAG 22737 Query 178111 AATCAACACTGCATCTTGT 178129 |||| ||||| || ||||| Sbjct 22736 AATCGACACTCCACCTTGT 22718 Score = 113 bits (124), Expect = 1e-19 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||||||||| || | || || ||||| ||||| || Sbjct 23190 TCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGTGATACTATCGACAACGTTAAGT 23131 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || |||||||| || ||||| || | |||||||| || | Sbjct 23130 CGAAGATCCAGGACAAGGAGGGGATCCCTCCTGATCAGCAGCGCTTGATCTTCGCTGGCA 23071 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 ||||||| || || || | || ||| | || ||||| |||| ||||| || || || | Sbjct 23070 AACAGCTTGAGGACGGTCGCACGCTTTCGGACTATAATATCCAGAAAGAGTCCACTCTCC 23011 Query 178123 ATCTTGT 178129 | || || Sbjct 23010 ACCTGGT 23004 >seq14 Length=966768 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 62777 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 62721 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| ||||| || || || || || || |||||||| || Sbjct 62720 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCG 62661 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 62660 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 62601 Query 178106 AAA 178108 || Sbjct 62600 GAA 62598 >seq84 Length=371308 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || || || |||||||| || || ||||||||||| || |||||||| Sbjct 307765 GACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 307824 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | ||||| ||| |||| || || || || || || || || Sbjct 307825 GATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 307880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725678635452