Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nalgiovense_20[genbank_20GCA_5F002072425.1_202017-03- 24] 1,956 sequences; 33,006,161 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq373 132 3e-26 seq5 102 5e-17 seq18 96.9 2e-15 >seq373 Length=4881 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 3170 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 3111 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 3110 ATCCATTCATGCGCGTCACTAATTAGATGACGA 3078 >seq5 Length=886509 Score = 102 bits (112), Expect = 5e-17 Identities = 200/293 (68%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 344563 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGTAACGGTA 344506 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314 |||||||||| | ||||| |||||| || || || | ||| | || ||| | Sbjct 344505 TTAAAACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGTCGGCCTCCT 344450 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 | |||| | || || ||||| | |||||||| || ||| | | | | | | Sbjct 344449 GCTTACCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCT 344390 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| || || || | ||||||| ||||| | || ||| Sbjct 344389 GACGACCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 344330 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || || || |||||||||||| || | ||| | ||||| |||||||| Sbjct 344329 GGTTTCATCTCCAAGTTTGTGCTATGCAAAAAGTGCAAGAACCCCGAGACCGA 344277 >seq18 Length=433890 Score = 96.9 bits (106), Expect = 2e-15 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 38077 AAATCCAATCATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAA 38136 ||||||| | | || || | || ||||||||||| || || ||||||||||| || | Sbjct 305258 AAATCCATTACTGGCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGA 305317 Query 38137 TATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTT 38196 | ||||| || || | | ||| |||| || | || || || || || || || || | Sbjct 305318 TGTTGTAGTCCGAAAGAGTACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCT 305377 Query 38197 GTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT 38256 | || || | ||| | || || |||||| || || ||| || || | || || | Sbjct 305378 GCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATGGTGT 305437 Query 38257 CTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCA 38316 || || ||||| |||| || ||||| || || ||||| || || || || ||||||| Sbjct 305438 CTGAGCTCTCAACCTCTAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCA 305497 Query 38317 T 38317 | Sbjct 305498 T 305498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334939215277436