Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nalgiovense_20[genbank_20GCA_5F002072425.1_202017-03-
24] 1,956 sequences; 33,006,161 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq373 132 3e-26
seq5 102 5e-17
seq18 96.9 2e-15
>seq373
Length=4881
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 3170 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 3111
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 3110 ATCCATTCATGCGCGTCACTAATTAGATGACGA 3078
>seq5
Length=886509
Score = 102 bits (112), Expect = 5e-17
Identities = 200/293 (68%), Gaps = 12/293 (4%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | || ||||||||||| ||||| |||||||
Sbjct 344563 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGTAACGGTA 344506
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314
|||||||||| | ||||| |||||| || || || | ||| | || ||| |
Sbjct 344505 TTAAAACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGTCGGCCTCCT 344450
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
| |||| | || || ||||| | |||||||| || ||| | | | | | |
Sbjct 344449 GCTTACCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCT 344390
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| | ||||| || || || | ||||||| ||||| | || |||
Sbjct 344389 GACGACCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 344330
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| || || |||||||||||| || | ||| | ||||| ||||||||
Sbjct 344329 GGTTTCATCTCCAAGTTTGTGCTATGCAAAAAGTGCAAGAACCCCGAGACCGA 344277
>seq18
Length=433890
Score = 96.9 bits (106), Expect = 2e-15
Identities = 166/241 (69%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 38077 AAATCCAATCATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAA 38136
||||||| | | || || | || ||||||||||| || || ||||||||||| || |
Sbjct 305258 AAATCCATTACTGGCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGA 305317
Query 38137 TATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTT 38196
| ||||| || || | | ||| |||| || | || || || || || || || || |
Sbjct 305318 TGTTGTAGTCCGAAAGAGTACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCT 305377
Query 38197 GTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT 38256
| || || | ||| | || || |||||| || || ||| || || | || || |
Sbjct 305378 GCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATGGTGT 305437
Query 38257 CTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCA 38316
|| || ||||| |||| || ||||| || || ||||| || || || || |||||||
Sbjct 305438 CTGAGCTCTCAACCTCTAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCA 305497
Query 38317 T 38317
|
Sbjct 305498 T 305498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334939215277436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |