Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nalgiovense_20[genbank_20GCA_5F002072425.1_202017-03- 24] 1,956 sequences; 33,006,161 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq18 141 1e-28 seq20 132 5e-26 seq3 93.3 5e-14 >seq18 Length=433890 Score = 141 bits (156), Expect = 1e-28 Identities = 177/239 (74%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || | | |||||||||||| |||| || |||||||| ||||| |||| Sbjct 305264 ATTACTGGCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGT 305323 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || ||||| ||| |||| || |||||||| || ||||| || | |||||||||| Sbjct 305324 AGTCCGAAAGAGTACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGT 305383 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534 | | || | | |||||||||| |||||| |||| | ||| | | | ||||| | Sbjct 305384 CAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTT-AACGTTGTCGATGGTGTCTGAG 305442 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || | |||||| || || || |||| || || |||||||| ||||| Sbjct 305443 CTC---TCAACCTCTAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 305498 Score = 131 bits (144), Expect = 2e-25 Identities = 132/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || |||||||| |||||||| | || |||||||||||||||||||| Sbjct 306049 CTCCTTCTGGATGTTATAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 306108 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| ||||| | || | || |||||||||| ||||||| ||||| ||| Sbjct 306109 GATCAAACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 306167 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || || || || | |||||||| ||||| || Sbjct 306168 TGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 306216 Score = 95.1 bits (104), Expect = 1e-14 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| ||||| || | || || | |||||||||||| || Sbjct 305763 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCCAACTGCTTGCCGGCAAA 305822 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||||| || | || |||||||||| |||||| ||| | ||| Sbjct 305823 GATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT-AACGT 305881 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | | ||||| || || || || | |||||||| || || |||| Sbjct 305882 TGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATGGTCTTTCCGGTCA 305932 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||||||||| || || || | || || ||||||||||| ||||| Sbjct 305536 TCCTTCTGAATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAG 305595 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||| ||||||| || | || |||||| || |||||| ||| | | Sbjct 305596 ATAAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTATCTTGGATCTTGGACTTCACATTA 305655 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || || | || || || ||||| || ||||| || || Sbjct 305656 TCGATGGTGTCGGATGACTCGACCTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTGACG 305715 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 305716 AAAATCTGCAT 305726 >seq20 Length=416849 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || || || | || |||||||||||||||||||| | Sbjct 354170 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 354229 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||| ||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 354230 TCAGGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 354288 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 354289 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 354348 Query 46583 AA 46584 || Sbjct 354349 AA 354350 >seq3 Length=1011523 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| | || ||||||||||| || ||||| Sbjct 590629 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 590570 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||| ||||||| || | | ||||||||| Sbjct 590569 GATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTC 590531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565224579921120